RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 IL2RBP14784 551 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 TRAF7Q6Q0C0 670 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 TFCP2L1Q9NZI6 479 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 PCDHB3Q9Y5E6 796 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 USP54Q70EL1 1684 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 QRICH2Q9H0J4 1663 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 IGSF1Q8N6C5 1336 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 LY75O60449 1722 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 SEMA3EO15041 775 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 BLOC1S3Q6QNY0 202 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 HSPA1AP0DMV8 641 aaKnown RBP3.12□□□□□ -1.91
NEDD1-204ENST00000457368 HSPA1BP0DMV9 641 aaKnown RBP3.12□□□□□ -1.91
NEDD1-204ENST00000457368 TGFB2P61812 414 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 KCNV2Q8TDN2 545 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 TUBGCP6Q96RT7 1819 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 PIK3C2AO00443 1686 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 ITGAEP38570 1179 aa3.12□□□□□ -1.91
NEDD1-204ENST00000457368 TTC21BQ7Z4L5 1316 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 KIAA1210Q9ULL0 1709 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 SMC1BQ8NDV3 1235 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 ACSBG1Q96GR2 724 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 S1PR4O95977 384 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 PRKCSHP14314 528 aaPredicted RBP3.11□□□□□ -1.91
NEDD1-204ENST00000457368 OSBPP22059 807 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 SLC4A3P48751 1232 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 ZNF526Q8TF50 670 aaPredicted RBP3.11□□□□□ -1.91
NEDD1-204ENST00000457368 SLC4A5Q9BY07 1137 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 NMRK2Q9NPI5 230 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 KDM6AO15550 1401 aaPredicted RBP3.11□□□□□ -1.91
NEDD1-204ENST00000457368 KDM2BQ8NHM5 1336 aa3.11□□□□□ -1.91
NEDD1-204ENST00000457368 FAM187AA6NFU0 413 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 CSB-PGBD3P0DP91 1061 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 CAMK2BQ13554 666 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 TJAP1Q5JTD0 557 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 RDH13Q8NBN7 331 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 CCNL1Q9UK58 526 aaPredicted RBP3.1□□□□□ -1.91
NEDD1-204ENST00000457368 CGNL1Q0VF96 1302 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 KIF13BQ9NQT8 1826 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 KIAA1551Q9HCM1 1747 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 SSFA2P28290 1259 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 LAPTM4BQ86VI4 370 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.1□□□□□ -1.91
NEDD1-204ENST00000457368 ST8SIA5O15466 376 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 CFHP08603 1231 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 C16orf71Q8IYS4 520 aaPredicted RBP3.1□□□□□ -1.91
NEDD1-204ENST00000457368 IL21Q9HBE4 155 aa3.1□□□□□ -1.91
NEDD1-204ENST00000457368 USP47Q96K76 1375 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 CEP350Q5VT06 3117 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 DDX11L8A8MPP1 907 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 PKDCCQ504Y2 493 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 RBM26Q5T8P6 1007 aaKnown RBP3.09□□□□□ -1.91
NEDD1-204ENST00000457368 SMARCC1Q92922 1105 aaPredicted RBP3.09□□□□□ -1.91
NEDD1-204ENST00000457368 DCAF5Q96JK2 942 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 CABP1Q9NZU7 370 aa3.09□□□□□ -1.91
NEDD1-204ENST00000457368 CENPJQ9HC77 1338 aaPredicted RBP3.09□□□□□ -1.91
NEDD1-204ENST00000457368 TNRC6CQ9HCJ0 1690 aaKnown RBP3.09□□□□□ -1.91
NEDD1-204ENST00000457368 FAM208AQ9UK61 1670 aaKnown RBP3.09□□□□□ -1.91
NEDD1-204ENST00000457368 ITGBL1O95965 494 aaPredicted RBP3.09□□□□□ -1.92
NEDD1-204ENST00000457368 CTCFP49711 727 aaPredicted RBP3.09□□□□□ -1.92
NEDD1-204ENST00000457368 ANKRD24Q8TF21 1146 aa3.09□□□□□ -1.92
NEDD1-204ENST00000457368 IP6K1Q92551 441 aa3.09□□□□□ -1.92
NEDD1-204ENST00000457368 KDM2AQ9Y2K7 1162 aa3.09□□□□□ -1.92
NEDD1-204ENST00000457368 TOGARAM1Q9Y4F4 1720 aa3.09□□□□□ -1.92
NEDD1-204ENST00000457368 POTECB2RU33 542 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 RNF223E7ERA6 249 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 HTRA3P83110 453 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 C9orf131Q5VYM1 1079 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 NLRP2Q9NX02 1062 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 MAP3K19Q56UN5 1328 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 RCCD1A6NED2 376 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 LCE2BO14633 110 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 FECHP22830 423 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 GGCXP38435 758 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 SRPK2P78362 688 aaKnown RBP3.08□□□□□ -1.92
NEDD1-204ENST00000457368 MSL1Q68DK7 614 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 ZNF787Q6DD87 383 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 CNTNAP1P78357 1384 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 PALLDQ8WX93 1383 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 SBNO2Q9Y2G9 1366 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 KCPQ6ZWJ8 1503 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 C5P01031 1676 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 SPDYE16A6NNV3 312 aaPredicted RBP3.08□□□□□ -1.92
NEDD1-204ENST00000457368 ZPR1O75312 459 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 VEGFAP15692 232 aaPredicted RBP3.08□□□□□ -1.92
NEDD1-204ENST00000457368 KCNA3P22001 575 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 SLF2Q8IX21 1173 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 ZCRB1Q8TBF4 217 aaKnown RBP3.08□□□□□ -1.92
NEDD1-204ENST00000457368 DCAF11Q8TEB1 546 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 ABHD8Q96I13 439 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 PUS7Q96PZ0 661 aaKnown RBP3.08□□□□□ -1.92
NEDD1-204ENST00000457368 EVC2Q86UK5 1308 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 CD163L1Q9NR16 1453 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 C4BP0C0L5 1744 aa3.08□□□□□ -1.92
NEDD1-204ENST00000457368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.07□□□□□ -1.92
NEDD1-204ENST00000457368 RTL1A6NKG5 1358 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 FOXN1O15353 648 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 SLC19A1P41440 591 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 MLLT1Q03111 559 aaPredicted RBP3.07□□□□□ -1.92
NEDD1-204ENST00000457368 LAPTM4AQ15012 233 aa3.07□□□□□ -1.92
NEDD1-204ENST00000457368 PKD1L3Q7Z443 1732 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms