RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 LTBP3Q9NS15 1303 aa16.6■□□□□ 0.25
TRA2B-206ENST00000456380 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
TRA2B-206ENST00000456380 NPHP1O15259 732 aa16.59■□□□□ 0.25
TRA2B-206ENST00000456380 ST5P78524 1137 aa16.59■□□□□ 0.25
TRA2B-206ENST00000456380 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
TRA2B-206ENST00000456380 MCM10Q7L590 875 aa16.59■□□□□ 0.25
TRA2B-206ENST00000456380 MASTLQ96GX5 879 aa16.59■□□□□ 0.25
TRA2B-206ENST00000456380 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
TRA2B-206ENST00000456380 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.24
TRA2B-206ENST00000456380 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
TRA2B-206ENST00000456380 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
TRA2B-206ENST00000456380 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRA2B-206ENST00000456380 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
TRA2B-206ENST00000456380 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
TRA2B-206ENST00000456380 DCTN1Q14203 1278 aa16.57■□□□□ 0.24
TRA2B-206ENST00000456380 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
TRA2B-206ENST00000456380 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
TRA2B-206ENST00000456380 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
TRA2B-206ENST00000456380 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
TRA2B-206ENST00000456380 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
TRA2B-206ENST00000456380 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
TRA2B-206ENST00000456380 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
TRA2B-206ENST00000456380 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
TRA2B-206ENST00000456380 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
TRA2B-206ENST00000456380 POTEIP0CG38 1075 aa16.55■□□□□ 0.24
TRA2B-206ENST00000456380 POTEJP0CG39 1038 aa16.55■□□□□ 0.24
TRA2B-206ENST00000456380 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
TRA2B-206ENST00000456380 ZNF652Q9Y2D9 606 aa16.55■□□□□ 0.24
TRA2B-206ENST00000456380 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
TRA2B-206ENST00000456380 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
TRA2B-206ENST00000456380 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
TRA2B-206ENST00000456380 NPR1P16066 1061 aa16.53■□□□□ 0.24
TRA2B-206ENST00000456380 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
TRA2B-206ENST00000456380 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRA2B-206ENST00000456380 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
TRA2B-206ENST00000456380 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
TRA2B-206ENST00000456380 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
TRA2B-206ENST00000456380 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
TRA2B-206ENST00000456380 RGL2O15211 777 aa16.52■□□□□ 0.23
TRA2B-206ENST00000456380 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.23
TRA2B-206ENST00000456380 HLFQ16534 295 aa16.52■□□□□ 0.23
TRA2B-206ENST00000456380 CCDC93Q567U6 631 aa16.52■□□□□ 0.23
TRA2B-206ENST00000456380 OLFM4Q6UX06 510 aa16.52■□□□□ 0.23
TRA2B-206ENST00000456380 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.23
TRA2B-206ENST00000456380 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
TRA2B-206ENST00000456380 TNS4Q8IZW8 715 aa16.51■□□□□ 0.23
TRA2B-206ENST00000456380 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRA2B-206ENST00000456380 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-206ENST00000456380 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
TRA2B-206ENST00000456380 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
TRA2B-206ENST00000456380 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
TRA2B-206ENST00000456380 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
TRA2B-206ENST00000456380 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
TRA2B-206ENST00000456380 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
TRA2B-206ENST00000456380 CAPN15O75808 1086 aa16.48■□□□□ 0.23
TRA2B-206ENST00000456380 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
TRA2B-206ENST00000456380 ZNF541Q9H0D2 1346 aa16.47■□□□□ 0.23
TRA2B-206ENST00000456380 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
TRA2B-206ENST00000456380 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
TRA2B-206ENST00000456380 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
TRA2B-206ENST00000456380 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
TRA2B-206ENST00000456380 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
TRA2B-206ENST00000456380 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
TRA2B-206ENST00000456380 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
TRA2B-206ENST00000456380 ERVV-1B6SEH8 477 aa16.45■□□□□ 0.22
TRA2B-206ENST00000456380 CRY2Q49AN0 593 aa16.45■□□□□ 0.22
TRA2B-206ENST00000456380 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
TRA2B-206ENST00000456380 FZD9O00144 591 aa16.44■□□□□ 0.22
TRA2B-206ENST00000456380 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
TRA2B-206ENST00000456380 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
TRA2B-206ENST00000456380 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
TRA2B-206ENST00000456380 TTLL7Q6ZT98 887 aa16.44■□□□□ 0.22
TRA2B-206ENST00000456380 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
TRA2B-206ENST00000456380 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
TRA2B-206ENST00000456380 RRP7AQ9Y3A4 280 aaKnown RBP16.44■□□□□ 0.22
TRA2B-206ENST00000456380 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
TRA2B-206ENST00000456380 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
TRA2B-206ENST00000456380 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
TRA2B-206ENST00000456380 SNED1Q8TER0 1413 aa16.43■□□□□ 0.22
TRA2B-206ENST00000456380 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
TRA2B-206ENST00000456380 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
TRA2B-206ENST00000456380 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
TRA2B-206ENST00000456380 SCN4AP35499 1836 aa16.43■□□□□ 0.22
TRA2B-206ENST00000456380 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
TRA2B-206ENST00000456380 NEFMP07197 916 aa16.42■□□□□ 0.22
TRA2B-206ENST00000456380 MYL6BP14649 208 aa16.42■□□□□ 0.22
TRA2B-206ENST00000456380 EPHX2P34913 555 aa16.42■□□□□ 0.22
TRA2B-206ENST00000456380 PSMD1Q99460 953 aa16.42■□□□□ 0.22
TRA2B-206ENST00000456380 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 TMEM88BA6NKF7 163 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 GPTP24298 496 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
TRA2B-206ENST00000456380 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
TRA2B-206ENST00000456380 SUSD4Q5VX71 490 aa16.4■□□□□ 0.22
TRA2B-206ENST00000456380 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
TRA2B-206ENST00000456380 GPC2Q8N158 579 aa16.4■□□□□ 0.22
TRA2B-206ENST00000456380 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
TRA2B-206ENST00000456380 LAMB4A4D0S4 1761 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms