RNA–Protein interactions for RNA: ENST00000455904.5

HDAC11-215, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-215ENST00000455904 ST5P78524 1137 aa23.97■■□□□ 1.43
HDAC11-215ENST00000455904 PRPF40BQ6NWY9 871 aaKnown RBP23.97■■□□□ 1.43
HDAC11-215ENST00000455904 CNKSR1Q969H4 720 aa23.97■■□□□ 1.43
HDAC11-215ENST00000455904 NPHP1O15259 732 aa23.96■■□□□ 1.43
HDAC11-215ENST00000455904 CAPN15O75808 1086 aa23.96■■□□□ 1.43
HDAC11-215ENST00000455904 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
HDAC11-215ENST00000455904 KCNQ3O43525 872 aa23.95■■□□□ 1.42
HDAC11-215ENST00000455904 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
HDAC11-215ENST00000455904 DZIP3Q86Y13 1208 aaKnown RBP23.95■■□□□ 1.42
HDAC11-215ENST00000455904 BTBD11A6QL63 1104 aa23.94■■□□□ 1.42
HDAC11-215ENST00000455904 CHADLQ6NUI6 762 aa23.94■■□□□ 1.42
HDAC11-215ENST00000455904 MASTLQ96GX5 879 aa23.94■■□□□ 1.42
HDAC11-215ENST00000455904 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
HDAC11-215ENST00000455904 PHACTR3Q96KR7 559 aa23.93■■□□□ 1.42
HDAC11-215ENST00000455904 CREBZFQ9NS37 354 aa23.93■■□□□ 1.42
HDAC11-215ENST00000455904 ADAMTSL1Q8N6G6 1762 aa23.93■■□□□ 1.42
HDAC11-215ENST00000455904 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
HDAC11-215ENST00000455904 DDNO94850 711 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-215ENST00000455904 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-215ENST00000455904 RSPH6AQ9H0K4 717 aa23.92■■□□□ 1.42
HDAC11-215ENST00000455904 POTEIP0CG38 1075 aa23.91■■□□□ 1.42
HDAC11-215ENST00000455904 POTEJP0CG39 1038 aa23.91■■□□□ 1.42
HDAC11-215ENST00000455904 PIP4K2AP48426 406 aaPredicted RBP23.91■■□□□ 1.42
HDAC11-215ENST00000455904 NUP98P52948 1817 aa23.91■■□□□ 1.42
HDAC11-215ENST00000455904 NBPF5PQ86XG9 351 aaPredicted RBP23.9■■□□□ 1.42
HDAC11-215ENST00000455904 USP16Q9Y5T5 823 aa23.9■■□□□ 1.42
HDAC11-215ENST00000455904 KDM3BQ7LBC6 1761 aa23.89■■□□□ 1.42
HDAC11-215ENST00000455904 CLEC4GQ6UXB4 293 aa23.89■■□□□ 1.41
HDAC11-215ENST00000455904 C7orf43Q8WVR3 580 aa23.89■■□□□ 1.41
HDAC11-215ENST00000455904 ZNF652Q9Y2D9 606 aa23.89■■□□□ 1.41
HDAC11-215ENST00000455904 PRAMEF22A3QJZ6 481 aa23.88■■□□□ 1.41
HDAC11-215ENST00000455904 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
HDAC11-215ENST00000455904 L3MBTL3Q96JM7 780 aaPredicted RBP23.88■■□□□ 1.41
HDAC11-215ENST00000455904 IQCA1LA6NCM1 817 aa23.87■■□□□ 1.41
HDAC11-215ENST00000455904 MKRN1Q9UHC7 482 aaKnown RBP23.87■■□□□ 1.41
HDAC11-215ENST00000455904 SNRPA1P09661 255 aaKnown RBP23.86■■□□□ 1.41
HDAC11-215ENST00000455904 NPR1P16066 1061 aa23.86■■□□□ 1.41
HDAC11-215ENST00000455904 CFAP53Q96M91 514 aa23.86■■□□□ 1.41
HDAC11-215ENST00000455904 PASKQ96RG2 1323 aa23.85■■□□□ 1.41
HDAC11-215ENST00000455904 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
HDAC11-215ENST00000455904 RGL2O15211 777 aa23.85■■□□□ 1.41
HDAC11-215ENST00000455904 LDHDQ86WU2 507 aa23.85■■□□□ 1.41
HDAC11-215ENST00000455904 CNTNAP1P78357 1384 aa23.85■■□□□ 1.41
HDAC11-215ENST00000455904 TAF1DQ9H5J8 278 aaPredicted RBP23.84■■□□□ 1.41
HDAC11-215ENST00000455904 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
HDAC11-215ENST00000455904 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
HDAC11-215ENST00000455904 FKBP4Q02790 459 aaKnown RBP eCLIP23.83■■□□□ 1.41
HDAC11-215ENST00000455904 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
HDAC11-215ENST00000455904 MCM10Q7L590 875 aa23.83■■□□□ 1.41
HDAC11-215ENST00000455904 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
HDAC11-215ENST00000455904 RTF1Q92541 710 aaKnown RBP23.82■■□□□ 1.4
HDAC11-215ENST00000455904 NIP7Q9Y221 180 aaKnown RBP eCLIP23.82■■□□□ 1.4
HDAC11-215ENST00000455904 TPTE2Q6XPS3 522 aa23.81■■□□□ 1.4
HDAC11-215ENST00000455904 ZNF277Q9NRM2 450 aaPredicted RBP23.81■■□□□ 1.4
HDAC11-215ENST00000455904 NUDCQ9Y266 331 aa23.81■■□□□ 1.4
HDAC11-215ENST00000455904 SNED1Q8TER0 1413 aa23.81■■□□□ 1.4
HDAC11-215ENST00000455904 U2AF1L5P0DN76 240 aaPredicted RBP23.8■■□□□ 1.4
HDAC11-215ENST00000455904 U2AF1Q01081 240 aaKnown RBP eCLIP23.8■■□□□ 1.4
HDAC11-215ENST00000455904 OLFM4Q6UX06 510 aa23.8■■□□□ 1.4
HDAC11-215ENST00000455904 RTKN2Q8IZC4 609 aa23.79■■□□□ 1.4
HDAC11-215ENST00000455904 TRPM7Q96QT4 1865 aa23.78■■□□□ 1.4
HDAC11-215ENST00000455904 ABCC12Q96J65 1359 aa23.78■■□□□ 1.4
HDAC11-215ENST00000455904 LTBP1Q14766 1721 aa23.77■■□□□ 1.4
HDAC11-215ENST00000455904 HTATSF1O43719 755 aaKnown RBP23.77■■□□□ 1.4
HDAC11-215ENST00000455904 ITGBL1O95965 494 aaPredicted RBP23.77■■□□□ 1.4
HDAC11-215ENST00000455904 DCTN1Q14203 1278 aa23.77■■□□□ 1.4
HDAC11-215ENST00000455904 HACL1Q9UJ83 578 aa23.77■■□□□ 1.4
HDAC11-215ENST00000455904 COL4A5P29400 1685 aa23.76■■□□□ 1.39
HDAC11-215ENST00000455904 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
HDAC11-215ENST00000455904 FOXN1O15353 648 aa23.76■■□□□ 1.39
HDAC11-215ENST00000455904 HLFQ16534 295 aa23.76■■□□□ 1.39
HDAC11-215ENST00000455904 EAPPQ56P03 285 aaPredicted RBP23.76■■□□□ 1.39
HDAC11-215ENST00000455904 TMEM88BA6NKF7 163 aa23.75■■□□□ 1.39
HDAC11-215ENST00000455904 PPP2R1AP30153 589 aa23.75■■□□□ 1.39
HDAC11-215ENST00000455904 EPHX2P34913 555 aa23.75■■□□□ 1.39
HDAC11-215ENST00000455904 IARSP41252 1262 aaKnown RBP23.75■■□□□ 1.39
HDAC11-215ENST00000455904 THSD7BQ9C0I4 1608 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 FZD9O00144 591 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 ALDH1B1P30837 517 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 CRY2Q49AN0 593 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
HDAC11-215ENST00000455904 VEGFBP49765 207 aa23.73■■□□□ 1.39
HDAC11-215ENST00000455904 TAF7Q15545 349 aaPredicted RBP23.72■■□□□ 1.39
HDAC11-215ENST00000455904 SYNE4Q8N205 404 aa23.72■■□□□ 1.39
HDAC11-215ENST00000455904 PSMD1Q99460 953 aa23.72■■□□□ 1.39
HDAC11-215ENST00000455904 PRDM10Q9NQV6 1147 aa23.72■■□□□ 1.39
HDAC11-215ENST00000455904 IBTKQ9P2D0 1353 aaPredicted RBP23.71■■□□□ 1.39
HDAC11-215ENST00000455904 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
HDAC11-215ENST00000455904 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
HDAC11-215ENST00000455904 GPC2Q8N158 579 aa23.71■■□□□ 1.39
HDAC11-215ENST00000455904 AIDAQ96BJ3 306 aa23.71■■□□□ 1.39
HDAC11-215ENST00000455904 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
HDAC11-215ENST00000455904 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.39
HDAC11-215ENST00000455904 NYXQ9GZU5 481 aa23.7■■□□□ 1.38
HDAC11-215ENST00000455904 LAMB2P55268 1798 aa23.7■■□□□ 1.38
HDAC11-215ENST00000455904 CTCFP49711 727 aaPredicted RBP23.69■■□□□ 1.38
HDAC11-215ENST00000455904 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
HDAC11-215ENST00000455904 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
HDAC11-215ENST00000455904 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms