RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CPA1P15085 419 aa16.3■□□□□ 0.2
PTPRE-204ENST00000455661 CAMK4Q16566 473 aa16.3■□□□□ 0.2
PTPRE-204ENST00000455661 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
PTPRE-204ENST00000455661 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
PTPRE-204ENST00000455661 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
PTPRE-204ENST00000455661 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 TXNDC2Q86VQ3 553 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 CHMP3Q9Y3E7 222 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
PTPRE-204ENST00000455661 PDCP20941 246 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
PTPRE-204ENST00000455661 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 ZNF75DP51815 510 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-204ENST00000455661 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 DDX19AQ9NUU7 478 aaKnown RBP16.28■□□□□ 0.2
PTPRE-204ENST00000455661 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-204ENST00000455661 LRMPQ12912 555 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 POLA2Q14181 598 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
PTPRE-204ENST00000455661 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-204ENST00000455661 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 IGSF3O75054 1194 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
PTPRE-204ENST00000455661 LIG1P18858 919 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
PTPRE-204ENST00000455661 PLA2G4DQ86XP0 818 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
PTPRE-204ENST00000455661 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.2
PTPRE-204ENST00000455661 SETD1AO15047 1707 aaKnown RBP16.27■□□□□ 0.19
PTPRE-204ENST00000455661 SPATA31D1Q6ZQQ2 1576 aa16.27■□□□□ 0.19
PTPRE-204ENST00000455661 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.19
PTPRE-204ENST00000455661 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.19
PTPRE-204ENST00000455661 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 ME3Q16798 604 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
PTPRE-204ENST00000455661 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 NRBP1Q9UHY1 535 aa16.26■□□□□ 0.19
PTPRE-204ENST00000455661 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 SPATA32Q96LK8 384 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-204ENST00000455661 NPHP3Q7Z494 1330 aa16.25■□□□□ 0.19
PTPRE-204ENST00000455661 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
PTPRE-204ENST00000455661 CAVIN2O95810 425 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 PTH1RQ03431 593 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 KCNB2Q92953 911 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 CACNA1FO60840 1977 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 ZNF165P49910 485 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-204ENST00000455661 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
PTPRE-204ENST00000455661 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
PTPRE-204ENST00000455661 SOX12O15370 315 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 DTNBO60941 627 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 PSMA5P28066 241 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 CDC25BP30305 580 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 KCNJ4P48050 445 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 RBM43Q6ZSC3 357 aaKnown RBP16.23■□□□□ 0.19
PTPRE-204ENST00000455661 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
PTPRE-204ENST00000455661 NEMFO60524 1076 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 ZNF592Q92610 1267 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 METP08581 1390 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
PTPRE-204ENST00000455661 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
PTPRE-204ENST00000455661 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 ACEP12821 1306 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 NECTIN1Q15223 517 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 KRT222Q8N1A0 295 aa16.22■□□□□ 0.19
PTPRE-204ENST00000455661 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
PTPRE-204ENST00000455661 ZNF397Q8NF99 534 aaPredicted RBP16.22■□□□□ 0.19
PTPRE-204ENST00000455661 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
PTPRE-204ENST00000455661 GOLGA6L19H0YKK7 550 aa16.21■□□□□ 0.19
PTPRE-204ENST00000455661 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
PTPRE-204ENST00000455661 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
PTPRE-204ENST00000455661 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
PTPRE-204ENST00000455661 LEO1Q8WVC0 666 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms