RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 HAND2P61296 217 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 CCDC181Q5TID7 509 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 TNPO1Q92973 898 aaKnown RBP7.68□□□□□ -1.18
HCG18-239ENST00000454129 SEC63Q9UGP8 760 aaKnown RBP7.68□□□□□ -1.18
HCG18-239ENST00000454129 GOLGA8BA8MQT2 603 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 PPFIA3O75145 1194 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 ARHGAP45Q92619 1136 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 RNF41Q9H4P4 317 aaPredicted RBP7.68□□□□□ -1.18
HCG18-239ENST00000454129 ANKRD36BQ8N2N9 1353 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 SLC39A6Q13433 755 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 COPS6Q7L5N1 327 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 C8orf58Q8NAV2 365 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 ZNF219Q9P2Y4 722 aaPredicted RBP7.68□□□□□ -1.18
HCG18-239ENST00000454129 ZRANB1Q9UGI0 708 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 PIK3R4Q99570 1358 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 EPB41L2O43491 1005 aaKnown RBP7.67□□□□□ -1.18
HCG18-239ENST00000454129 CKAP2LQ8IYA6 745 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 SEPT11Q9NVA2 429 aaKnown RBP7.67□□□□□ -1.18
HCG18-239ENST00000454129 KIAA0556O60303 1618 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 ARHGAP29Q52LW3 1261 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
HCG18-239ENST00000454129 ANO10Q9NW15 660 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 CHPF2Q9P2E5 772 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 USP16Q9Y5T5 823 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 USP19O94966 1318 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 GOLGA8AA7E2F4 631 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 SFPQP23246 707 aaKnown RBP eCLIP7.67□□□□□ -1.18
HCG18-239ENST00000454129 CCDC183Q5T5S1 534 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 TTC22Q5TAA0 569 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 XAGE3Q8WTP9 111 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 CDC5LQ99459 802 aaKnown RBP7.67□□□□□ -1.18
HCG18-239ENST00000454129 POLKQ9UBT6 870 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
HCG18-239ENST00000454129 DDX46Q7L014 1031 aaKnown RBP7.66□□□□□ -1.18
HCG18-239ENST00000454129 TNRQ92752 1358 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 H0YHG0 523 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 SDSP20132 328 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 ZSCAN30Q86W11 494 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 TXLNBQ8N3L3 684 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 ORC3Q9UBD5 711 aaPredicted RBP7.66□□□□□ -1.18
HCG18-239ENST00000454129 CCDC194A0A1B0GVG4 234 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 STX6O43752 255 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 ERLIN2O94905 339 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 IARSP41252 1262 aaKnown RBP7.66□□□□□ -1.18
HCG18-239ENST00000454129 HDAC1Q13547 482 aaPredicted RBP7.66□□□□□ -1.18
HCG18-239ENST00000454129 CCDC96Q2M329 555 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 MICU3Q86XE3 530 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 RAB11FIP4Q86YS3 637 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 NEK1Q96PY6 1258 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 PANK2Q9BZ23 570 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 NEFHP12036 1026 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 NLRP5P59047 1200 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 EIF4A2Q14240 407 aaKnown RBP7.66□□□□□ -1.18
HCG18-239ENST00000454129 CATIPQ7Z7H3 387 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 TBC1D32Q96NH3 1257 aa7.66□□□□□ -1.18
HCG18-239ENST00000454129 GJB2P29033 226 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 NUCB1Q02818 461 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 SSRP1Q08945 709 aaKnown RBP7.65□□□□□ -1.18
HCG18-239ENST00000454129 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 LMBR1LQ6UX01 489 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 FSIP1Q8NA03 581 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 ZCRB1Q8TBF4 217 aaKnown RBP7.65□□□□□ -1.18
HCG18-239ENST00000454129 TTC21AQ8NDW8 1320 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 PDE1AP54750 535 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 TTF1Q15361 905 aaPredicted RBP7.65□□□□□ -1.18
HCG18-239ENST00000454129 KIAA1328Q86T90 577 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 ANKRD44Q8N8A2 993 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 TCEANC2Q96MN5 208 aa7.65□□□□□ -1.18
HCG18-239ENST00000454129 LDHCP07864 332 aa7.65□□□□□ -1.19
HCG18-239ENST00000454129 CNNM3Q8NE01 707 aa7.65□□□□□ -1.19
HCG18-239ENST00000454129 UBXN4Q92575 508 aa7.65□□□□□ -1.19
HCG18-239ENST00000454129 TSPY2A6NKD2 308 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 BIN1O00499 593 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 ERLIN1O75477 346 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 BAG4O95429 457 aaKnown RBP7.64□□□□□ -1.19
HCG18-239ENST00000454129 BRF1Q92994 677 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 VAT1LQ9HCJ6 419 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 GRM8O00222 908 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 MATR3P43243 847 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■□□ 14.6
HCG18-239ENST00000454129 MFSD6Q6ZSS7 791 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 SLF2Q8IX21 1173 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 CABLES1Q8TDN4 633 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 TESK2Q96S53 571 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 RAB34Q9BZG1 259 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 TSPYL1Q9H0U9 437 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 CENPHQ9H3R5 247 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 PLEKHH1Q9ULM0 1364 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 PLCH2O75038 1416 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 UQCRHLA0A096LP55 91 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 GOLGA6L10A6NI86 522 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 UQCRHP07919 91 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 MTHFSDQ2M296 383 aaKnown RBP7.64□□□□□ -1.19
HCG18-239ENST00000454129 KRT24Q2M2I5 525 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 KSR2Q6VAB6 950 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 C16orf71Q8IYS4 520 aaPredicted RBP7.64□□□□□ -1.19
HCG18-239ENST00000454129 TSPYL6Q8N831 410 aa7.64□□□□□ -1.19
HCG18-239ENST00000454129 NECAB1Q8N987 351 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms