RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 BRIP1Q9BX63 1249 aa15.61■□□□□ 0.09
GARNL3-210ENST00000453030 GLTPD2A6NH11 291 aa15.6■□□□□ 0.09
GARNL3-210ENST00000453030 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
GARNL3-210ENST00000453030 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
GARNL3-210ENST00000453030 SMC1BQ8NDV3 1235 aa15.6■□□□□ 0.09
GARNL3-210ENST00000453030 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
GARNL3-210ENST00000453030 ST5P78524 1137 aa15.59■□□□□ 0.09
GARNL3-210ENST00000453030 NUP98P52948 1817 aa15.59■□□□□ 0.09
GARNL3-210ENST00000453030 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
GARNL3-210ENST00000453030 PDZRN3Q9UPQ7 1066 aa15.58■□□□□ 0.08
GARNL3-210ENST00000453030 VEGFAP15692 232 aaPredicted RBP15.57■□□□□ 0.08
GARNL3-210ENST00000453030 PRPF40BQ6NWY9 871 aaKnown RBP15.57■□□□□ 0.08
GARNL3-210ENST00000453030 SNRPA1P09661 255 aaKnown RBP15.56■□□□□ 0.08
GARNL3-210ENST00000453030 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
GARNL3-210ENST00000453030 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
GARNL3-210ENST00000453030 TAOK3Q9H2K8 898 aa15.56■□□□□ 0.08
GARNL3-210ENST00000453030 ZNF652Q9Y2D9 606 aa15.56■□□□□ 0.08
GARNL3-210ENST00000453030 SRGNP10124 158 aa15.55■□□□□ 0.08
GARNL3-210ENST00000453030 STYK1Q6J9G0 422 aa15.55■□□□□ 0.08
GARNL3-210ENST00000453030 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
GARNL3-210ENST00000453030 DPY19L2Q6NUT2 758 aa15.54■□□□□ 0.08
GARNL3-210ENST00000453030 MASTLQ96GX5 879 aa15.54■□□□□ 0.08
GARNL3-210ENST00000453030 LTBP3Q9NS15 1303 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 SCN4AP35499 1836 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 FAM177BA6PVY3 158 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 POTECB2RU33 542 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
GARNL3-210ENST00000453030 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
GARNL3-210ENST00000453030 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
GARNL3-210ENST00000453030 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
GARNL3-210ENST00000453030 JMYQ8N9B5 988 aa15.52■□□□□ 0.08
GARNL3-210ENST00000453030 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
GARNL3-210ENST00000453030 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
GARNL3-210ENST00000453030 SOGA3Q5TF21 947 aa15.51■□□□□ 0.07
GARNL3-210ENST00000453030 DDNO94850 711 aaPredicted RBP15.5■□□□□ 0.07
GARNL3-210ENST00000453030 NEFMP07197 916 aa15.5■□□□□ 0.07
GARNL3-210ENST00000453030 CCDC93Q567U6 631 aa15.5■□□□□ 0.07
GARNL3-210ENST00000453030 NPR1P16066 1061 aa15.49■□□□□ 0.07
GARNL3-210ENST00000453030 HLFQ16534 295 aa15.49■□□□□ 0.07
GARNL3-210ENST00000453030 OLFM4Q6UX06 510 aa15.49■□□□□ 0.07
GARNL3-210ENST00000453030 NGEFQ8N5V2 710 aa15.49■□□□□ 0.07
GARNL3-210ENST00000453030 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
GARNL3-210ENST00000453030 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
GARNL3-210ENST00000453030 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
GARNL3-210ENST00000453030 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
GARNL3-210ENST00000453030 TPTE2Q6XPS3 522 aa15.48■□□□□ 0.07
GARNL3-210ENST00000453030 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
GARNL3-210ENST00000453030 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-210ENST00000453030 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-210ENST00000453030 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
GARNL3-210ENST00000453030 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-210ENST00000453030 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.07
GARNL3-210ENST00000453030 RGL2O15211 777 aa15.46■□□□□ 0.07
GARNL3-210ENST00000453030 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
GARNL3-210ENST00000453030 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
GARNL3-210ENST00000453030 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
GARNL3-210ENST00000453030 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
GARNL3-210ENST00000453030 KLRG2A4D1S0 409 aaPredicted RBP15.45■□□□□ 0.06
GARNL3-210ENST00000453030 MYL6BP14649 208 aa15.45■□□□□ 0.06
GARNL3-210ENST00000453030 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
GARNL3-210ENST00000453030 KIF6Q6ZMV9 814 aa15.45■□□□□ 0.06
GARNL3-210ENST00000453030 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
GARNL3-210ENST00000453030 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
GARNL3-210ENST00000453030 RRP7AQ9Y3A4 280 aaKnown RBP15.45■□□□□ 0.06
GARNL3-210ENST00000453030 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 LAMB2P55268 1798 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 ADAMTSL1Q8N6G6 1762 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 IQCA1LA6NCM1 817 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 HSPA1AP0DMV8 641 aaKnown RBP15.44■□□□□ 0.06
GARNL3-210ENST00000453030 HSPA1BP0DMV9 641 aaKnown RBP15.44■□□□□ 0.06
GARNL3-210ENST00000453030 GPTP24298 496 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 EIF4A1P60842 406 aaKnown RBP15.44■□□□□ 0.06
GARNL3-210ENST00000453030 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 ZBTB3Q9H5J0 574 aa15.44■□□□□ 0.06
GARNL3-210ENST00000453030 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
GARNL3-210ENST00000453030 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
GARNL3-210ENST00000453030 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
GARNL3-210ENST00000453030 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
GARNL3-210ENST00000453030 COL4A5P29400 1685 aa15.42■□□□□ 0.06
GARNL3-210ENST00000453030 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
GARNL3-210ENST00000453030 EAPPQ56P03 285 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-210ENST00000453030 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
GARNL3-210ENST00000453030 TAF1DQ9H5J8 278 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-210ENST00000453030 MKRN1Q9UHC7 482 aaKnown RBP15.42■□□□□ 0.06
GARNL3-210ENST00000453030 IBTKQ9P2D0 1353 aaPredicted RBP15.41■□□□□ 0.06
GARNL3-210ENST00000453030 ERVV-1B6SEH8 477 aa15.41■□□□□ 0.06
GARNL3-210ENST00000453030 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
GARNL3-210ENST00000453030 LDHDQ86WU2 507 aa15.41■□□□□ 0.06
GARNL3-210ENST00000453030 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
GARNL3-210ENST00000453030 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
GARNL3-210ENST00000453030 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
GARNL3-210ENST00000453030 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 CAPN15O75808 1086 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 SLC51AQ86UW1 340 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 TNS4Q8IZW8 715 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
GARNL3-210ENST00000453030 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms