RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 COL5A2P05997 1499 aaPredicted RBP14.39□□□□□ -0.11
VTA1-203ENST00000452973 IFIT2P09913 472 aaKnown RBP14.38□□□□□ -0.11
VTA1-203ENST00000452973 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■■□□□ 14.2
VTA1-203ENST00000452973 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 AACSQ86V21 672 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 HDAC5Q9UQL6 1122 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 KAT6BQ8WYB5 2073 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 CRYBG1Q9Y4K1 1723 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 NOL8Q76FK4 1167 aaKnown RBP14.38□□□□□ -0.11
VTA1-203ENST00000452973 PI4K2BQ8TCG2 481 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 IL25Q9H293 177 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.38□□□□□ -0.11
VTA1-203ENST00000452973 CCDC8Q9H0W5 538 aaPredicted RBP14.38□□□□□ -0.11
VTA1-203ENST00000452973 C5P01031 1676 aa14.38□□□□□ -0.11
VTA1-203ENST00000452973 MTX1Q13505 466 aa14.37□□□□□ -0.11
VTA1-203ENST00000452973 A0A087WZG4 1122 aa14.37□□□□□ -0.11
VTA1-203ENST00000452973 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
VTA1-203ENST00000452973 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 NBPF14Q5TI25 921 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 NBPF10Q6P3W6 841 aaKnown RBP14.36□□□□□ -0.11
VTA1-203ENST00000452973 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 NBPF15Q8N660 670 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 ZBTB3Q9H5J0 574 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
VTA1-203ENST00000452973 ADAMTS7Q9UKP4 1686 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 A0A0G2JS52 829 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 NEK4P51957 841 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
VTA1-203ENST00000452973 TTLL7Q6ZT98 887 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
VTA1-203ENST00000452973 ST18O60284 1047 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 MCM4P33991 863 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 PALD1Q9ULE6 856 aa14.36□□□□□ -0.11
VTA1-203ENST00000452973 SASH1O94885 1247 aa14.35□□□□□ -0.11
VTA1-203ENST00000452973 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
VTA1-203ENST00000452973 ERVV-2B6SEH9 535 aa14.35□□□□□ -0.11
VTA1-203ENST00000452973 SYTL4Q96C24 671 aaPredicted RBP14.35□□□□□ -0.11
VTA1-203ENST00000452973 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
VTA1-203ENST00000452973 ERC1Q8IUD2 1116 aa14.34□□□□□ -0.11
VTA1-203ENST00000452973 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
VTA1-203ENST00000452973 MCCP23508 829 aa14.34□□□□□ -0.11
VTA1-203ENST00000452973 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
VTA1-203ENST00000452973 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
VTA1-203ENST00000452973 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
VTA1-203ENST00000452973 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
VTA1-203ENST00000452973 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
VTA1-203ENST00000452973 UTYO14607 1347 aa14.33□□□□□ -0.12
VTA1-203ENST00000452973 AOX1Q06278 1338 aa14.33□□□□□ -0.12
VTA1-203ENST00000452973 GLRX3O76003 335 aaKnown RBP14.33□□□□□ -0.12
VTA1-203ENST00000452973 PLBD2Q8NHP8 589 aa14.33□□□□□ -0.12
VTA1-203ENST00000452973 GPATCH3Q96I76 525 aa14.33□□□□□ -0.12
VTA1-203ENST00000452973 ASAP1Q9ULH1 1129 aa14.33□□□□□ -0.12
VTA1-203ENST00000452973 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 DDIT3P35638 169 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 DIAPH3Q9NSV4 1193 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 ABCC6O95255 1503 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 MRC1P22897 1456 aa14.32□□□□□ -0.12
VTA1-203ENST00000452973 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
VTA1-203ENST00000452973 SSFA2P28290 1259 aa14.31□□□□□ -0.12
VTA1-203ENST00000452973 LMBR1LQ6UX01 489 aa14.31□□□□□ -0.12
VTA1-203ENST00000452973 KIAA1211Q6ZU35 1233 aa14.31□□□□□ -0.12
VTA1-203ENST00000452973 TTC41PQ6P2S7 1318 aa14.31□□□□□ -0.12
VTA1-203ENST00000452973 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
VTA1-203ENST00000452973 PIGBQ92521 554 aa14.3□□□□□ -0.12
VTA1-203ENST00000452973 SGSM2O43147 1006 aa14.29□□□□□ -0.12
VTA1-203ENST00000452973 DNAJC10Q8IXB1 793 aa14.29□□□□□ -0.12
VTA1-203ENST00000452973 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
VTA1-203ENST00000452973 TFCP2Q12800 502 aa14.29□□□□□ -0.12
VTA1-203ENST00000452973 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
VTA1-203ENST00000452973 FOXD4L5Q5VV16 416 aaPredicted RBP14.29□□□□□ -0.12
VTA1-203ENST00000452973 FOXD4L4Q8WXT5 416 aaPredicted RBP14.29□□□□□ -0.12
VTA1-203ENST00000452973 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
VTA1-203ENST00000452973 PKP1Q13835 747 aa14.28□□□□□ -0.12
VTA1-203ENST00000452973 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 PARP4Q9UKK3 1724 aaKnown RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 TRAK2O60296 914 aa14.28□□□□□ -0.12
VTA1-203ENST00000452973 PTPN12Q05209 780 aaKnown RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 CWC25Q9NXE8 425 aaPredicted RBP14.28□□□□□ -0.12
VTA1-203ENST00000452973 AK9Q5TCS8 1911 aa14.27□□□□□ -0.13
VTA1-203ENST00000452973 PIP4K2BP78356 416 aa14.27□□□□□ -0.13
VTA1-203ENST00000452973 GBP4Q96PP9 640 aa14.27□□□□□ -0.13
VTA1-203ENST00000452973 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
VTA1-203ENST00000452973 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 EXOC5O00471 708 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 RFX5P48382 616 aaPredicted RBP14.26□□□□□ -0.13
VTA1-203ENST00000452973 ZNF594Q96JF6 807 aaPredicted RBP14.26□□□□□ -0.13
VTA1-203ENST00000452973 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
VTA1-203ENST00000452973 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms