RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 GSDMDP57764 484 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 UBE2HP62256 183 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 TSG101Q99816 390 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 DZIP1Q86YF9 867 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 TNRQ92752 1358 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 ANAPC15P60006 121 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 KRT28Q7Z3Y7 464 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 FSIP1Q8NA03 581 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 NEK1Q96PY6 1258 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 SPA17Q15506 151 aa15.33■□□□□ 0.05
SMARCA4-205ENST00000450717 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.05
SMARCA4-205ENST00000450717 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.05
SMARCA4-205ENST00000450717 JAKMIP3Q5VZ66 844 aa15.33■□□□□ 0.05
SMARCA4-205ENST00000450717 A2MP01023 1474 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 KIF5CO60282 957 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 NEFHP12036 1026 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
SMARCA4-205ENST00000450717 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 GOLIM4O00461 696 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 GUCY1B3Q02153 619 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 RANBP6O60518 1105 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 SDSP20132 328 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 CASQ1P31415 396 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 ZNF444Q8N0Y2 327 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 USP25Q9UHP3 1055 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 ANKRD24Q8TF21 1146 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 SNX21Q969T3 373 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 PCDHB15Q9Y5E8 787 aa15.32■□□□□ 0.04
SMARCA4-205ENST00000450717 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 MCM3P25205 808 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 TNIP1Q15025 636 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 CKAP2LQ8IYA6 745 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 GOLGA6L7A0A1B0GV03 622 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 KIF20AO95235 890 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 ZNF518AQ6AHZ1 1483 aa15.31■□□□□ 0.04
SMARCA4-205ENST00000450717 TMX3Q96JJ7 454 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 IARSP41252 1262 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 ZFYVE9O95405 1425 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 CCDC194A0A1B0GVG4 234 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 DESP17661 470 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 CALRP27797 417 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 PDE1AP54750 535 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 ZSCAN22P10073 491 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 KANK3Q6NY19 840 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 NLRP5P59047 1200 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 MEIS3Q99687 375 aa15.3■□□□□ 0.04
SMARCA4-205ENST00000450717 MAP9Q49MG5 647 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 UBE3BQ7Z3V4 1068 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 PAF1Q8N7H5 531 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 CCDC12Q8WUD4 166 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 LDHAL6AQ6ZMR3 332 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 ESYT1Q9BSJ8 1104 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 KIF5BP33176 963 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 TMEM67Q5HYA8 995 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 UHRF1BP1LA0JNW5 1464 aa15.29■□□□□ 0.04
SMARCA4-205ENST00000450717 EXOC5O00471 708 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 ANKRD13DQ6ZTN6 518 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 ADCY5O95622 1261 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 YEATS4O95619 227 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 LRSAM1Q6UWE0 723 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 VPS36Q86VN1 386 aa15.28■□□□□ 0.04
SMARCA4-205ENST00000450717 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms