RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 SRGNP10124 158 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 SOX10P56693 466 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 CST9Q5W186 159 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 TLL2Q9Y6L7 1015 aa17.43■□□□□ 0.38
AC004540.1-204ENST00000449537 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
AC004540.1-204ENST00000449537 A0A087WZG4 1122 aa17.42■□□□□ 0.38
AC004540.1-204ENST00000449537 NPHP1O15259 732 aa17.42■□□□□ 0.38
AC004540.1-204ENST00000449537 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
AC004540.1-204ENST00000449537 CCDC93Q567U6 631 aa17.42■□□□□ 0.38
AC004540.1-204ENST00000449537 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC004540.1-204ENST00000449537 GPC2Q8N158 579 aa17.41■□□□□ 0.38
AC004540.1-204ENST00000449537 C7orf43Q8WVR3 580 aa17.41■□□□□ 0.38
AC004540.1-204ENST00000449537 FZD9O00144 591 aa17.4■□□□□ 0.38
AC004540.1-204ENST00000449537 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
AC004540.1-204ENST00000449537 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
AC004540.1-204ENST00000449537 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 ST5P78524 1137 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 CNBD1Q8NA66 436 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
AC004540.1-204ENST00000449537 TRAF5O00463 557 aa17.37■□□□□ 0.37
AC004540.1-204ENST00000449537 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
AC004540.1-204ENST00000449537 COL11A2P13942 1736 aaPredicted RBP17.37■□□□□ 0.37
AC004540.1-204ENST00000449537 STARD3NLO95772 234 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 CIAPIN1Q6FI81 312 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 JDP2Q8WYK2 163 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 GJA3Q9Y6H8 435 aa17.36■□□□□ 0.37
AC004540.1-204ENST00000449537 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
AC004540.1-204ENST00000449537 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
AC004540.1-204ENST00000449537 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
AC004540.1-204ENST00000449537 HHIPL1Q96JK4 782 aa17.35■□□□□ 0.37
AC004540.1-204ENST00000449537 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
AC004540.1-204ENST00000449537 EPS15P42566 896 aa17.34■□□□□ 0.37
AC004540.1-204ENST00000449537 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
AC004540.1-204ENST00000449537 USP50Q70EL3 339 aaPredicted RBP17.34■□□□□ 0.37
AC004540.1-204ENST00000449537 LGR6Q9HBX8 967 aa17.34■□□□□ 0.37
AC004540.1-204ENST00000449537 NPR1P16066 1061 aa17.33■□□□□ 0.36
AC004540.1-204ENST00000449537 AEBP1Q8IUX7 1158 aa17.33■□□□□ 0.36
AC004540.1-204ENST00000449537 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
AC004540.1-204ENST00000449537 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
AC004540.1-204ENST00000449537 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
AC004540.1-204ENST00000449537 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
AC004540.1-204ENST00000449537 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
AC004540.1-204ENST00000449537 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
AC004540.1-204ENST00000449537 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
AC004540.1-204ENST00000449537 SCNN1DP51172 638 aa17.3■□□□□ 0.36
AC004540.1-204ENST00000449537 NOGQ13253 232 aa17.3■□□□□ 0.36
AC004540.1-204ENST00000449537 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
AC004540.1-204ENST00000449537 RNMTO43148 476 aaKnown RBP17.29■□□□□ 0.36
AC004540.1-204ENST00000449537 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
AC004540.1-204ENST00000449537 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
AC004540.1-204ENST00000449537 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
AC004540.1-204ENST00000449537 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-204ENST00000449537 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-204ENST00000449537 ZIC5Q96T25 663 aa17.27■□□□□ 0.36
AC004540.1-204ENST00000449537 PSMD1Q99460 953 aa17.27■□□□□ 0.36
AC004540.1-204ENST00000449537 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-204ENST00000449537 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
AC004540.1-204ENST00000449537 HABP4Q5JVS0 413 aaKnown RBP17.26■□□□□ 0.35
AC004540.1-204ENST00000449537 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
AC004540.1-204ENST00000449537 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
AC004540.1-204ENST00000449537 GLIS2Q9BZE0 524 aaPredicted RBP17.25■□□□□ 0.35
AC004540.1-204ENST00000449537 ADARB2Q9NS39 739 aaKnown RBP17.25■□□□□ 0.35
AC004540.1-204ENST00000449537 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
AC004540.1-204ENST00000449537 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
AC004540.1-204ENST00000449537 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
AC004540.1-204ENST00000449537 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
AC004540.1-204ENST00000449537 TRPA1O75762 1119 aa17.22■□□□□ 0.35
AC004540.1-204ENST00000449537 CC2D2BQ6DHV5 1058 aa17.22■□□□□ 0.35
AC004540.1-204ENST00000449537 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
AC004540.1-204ENST00000449537 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
AC004540.1-204ENST00000449537 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 A1BGP04217 495 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 HUNKP57058 714 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 CLEC4GQ6UXB4 293 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
AC004540.1-204ENST00000449537 CDC37L1Q7L3B6 337 aa17.2■□□□□ 0.34
AC004540.1-204ENST00000449537 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
AC004540.1-204ENST00000449537 MRC1P22897 1456 aa17.19■□□□□ 0.34
AC004540.1-204ENST00000449537 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
AC004540.1-204ENST00000449537 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
AC004540.1-204ENST00000449537 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
AC004540.1-204ENST00000449537 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
AC004540.1-204ENST00000449537 HEG1Q9ULI3 1381 aa17.18■□□□□ 0.34
AC004540.1-204ENST00000449537 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms