RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 OS9Q13438 667 aaPredicted RBP20.29■□□□□ 0.84
SNHG17-207ENST00000449469 VPS53Q5VIR6 699 aa20.29■□□□□ 0.84
SNHG17-207ENST00000449469 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
SNHG17-207ENST00000449469 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
SNHG17-207ENST00000449469 STX6O43752 255 aa20.28■□□□□ 0.84
SNHG17-207ENST00000449469 AK2P54819 239 aa20.28■□□□□ 0.84
SNHG17-207ENST00000449469 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
SNHG17-207ENST00000449469 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
SNHG17-207ENST00000449469 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
SNHG17-207ENST00000449469 EVI5LQ96CN4 794 aa20.27■□□□□ 0.84
SNHG17-207ENST00000449469 SMC3Q9UQE7 1217 aa20.27■□□□□ 0.84
SNHG17-207ENST00000449469 HEG1Q9ULI3 1381 aa20.27■□□□□ 0.84
SNHG17-207ENST00000449469 CAMTA1Q9Y6Y1 1673 aa20.27■□□□□ 0.84
SNHG17-207ENST00000449469 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
SNHG17-207ENST00000449469 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.27■□□□□ 0.84
SNHG17-207ENST00000449469 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 CHAMP1Q96JM3 812 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 SLIT3O75094 1523 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
SNHG17-207ENST00000449469 F13A1P00488 732 aa20.25■□□□□ 0.83
SNHG17-207ENST00000449469 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
SNHG17-207ENST00000449469 CWC27Q6UX04 472 aaKnown RBP20.25■□□□□ 0.83
SNHG17-207ENST00000449469 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
SNHG17-207ENST00000449469 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
SNHG17-207ENST00000449469 UTYO14607 1347 aa20.25■□□□□ 0.83
SNHG17-207ENST00000449469 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
SNHG17-207ENST00000449469 RNMTO43148 476 aaKnown RBP20.24■□□□□ 0.83
SNHG17-207ENST00000449469 MAP4K4O95819 1239 aaPredicted RBP20.24■□□□□ 0.83
SNHG17-207ENST00000449469 SYT1P21579 422 aa20.24■□□□□ 0.83
SNHG17-207ENST00000449469 RASEFQ8IZ41 740 aa20.24■□□□□ 0.83
SNHG17-207ENST00000449469 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
SNHG17-207ENST00000449469 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
SNHG17-207ENST00000449469 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
SNHG17-207ENST00000449469 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
SNHG17-207ENST00000449469 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
SNHG17-207ENST00000449469 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
SNHG17-207ENST00000449469 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
SNHG17-207ENST00000449469 GADD45BO75293 160 aaPredicted RBP20.22■□□□□ 0.83
SNHG17-207ENST00000449469 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
SNHG17-207ENST00000449469 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
SNHG17-207ENST00000449469 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
SNHG17-207ENST00000449469 PDRG1Q9NUG6 133 aa20.22■□□□□ 0.83
SNHG17-207ENST00000449469 MAP3K2Q9Y2U5 619 aa20.22■□□□□ 0.83
SNHG17-207ENST00000449469 SIPA1L3O60292 1781 aaPredicted RBP20.22■□□□□ 0.83
SNHG17-207ENST00000449469 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
SNHG17-207ENST00000449469 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
SNHG17-207ENST00000449469 PTMAP06454 111 aaKnown RBP20.21■□□□□ 0.83
SNHG17-207ENST00000449469 PSMA5P28066 241 aa20.21■□□□□ 0.83
SNHG17-207ENST00000449469 PSME1Q06323 249 aa20.21■□□□□ 0.83
SNHG17-207ENST00000449469 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
SNHG17-207ENST00000449469 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
SNHG17-207ENST00000449469 RGPD2P0DJD1 1756 aa20.2■□□□□ 0.82
SNHG17-207ENST00000449469 KIAA2012Q0VF49 1180 aa20.2■□□□□ 0.82
SNHG17-207ENST00000449469 NECTIN1Q15223 517 aa20.2■□□□□ 0.82
SNHG17-207ENST00000449469 JAKMIP1Q96N16 626 aaKnown RBP20.2■□□□□ 0.82
SNHG17-207ENST00000449469 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
SNHG17-207ENST00000449469 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
SNHG17-207ENST00000449469 MRC1P22897 1456 aa20.19■□□□□ 0.82
SNHG17-207ENST00000449469 GRM8O00222 908 aa20.19■□□□□ 0.82
SNHG17-207ENST00000449469 KCNQ3O43525 872 aa20.19■□□□□ 0.82
SNHG17-207ENST00000449469 ANKRD1Q15327 319 aa20.19■□□□□ 0.82
SNHG17-207ENST00000449469 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
SNHG17-207ENST00000449469 GDPD2Q9HCC8 539 aa20.19■□□□□ 0.82
SNHG17-207ENST00000449469 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
SNHG17-207ENST00000449469 ARHGEF25Q86VW2 580 aa20.18■□□□□ 0.82
SNHG17-207ENST00000449469 PXDNQ92626 1479 aa20.18■□□□□ 0.82
SNHG17-207ENST00000449469 PDCP20941 246 aa20.18■□□□□ 0.82
SNHG17-207ENST00000449469 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNHG17-207ENST00000449469 TCHHQ07283 1943 aa20.18■□□□□ 0.82
SNHG17-207ENST00000449469 PLEKHG2Q9H7P9 1386 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 GJB2P29033 226 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNHG17-207ENST00000449469 PRPF40BQ6NWY9 871 aaKnown RBP20.17■□□□□ 0.82
SNHG17-207ENST00000449469 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 AACSQ86V21 672 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 ANKLE2Q86XL3 938 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 MTMR6Q9Y217 621 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
SNHG17-207ENST00000449469 MTERF4Q7Z6M4 381 aaKnown RBP20.17■□□□□ 0.82
SNHG17-207ENST00000449469 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
SNHG17-207ENST00000449469 PTH1RQ03431 593 aa20.16■□□□□ 0.82
SNHG17-207ENST00000449469 HMG20BQ9P0W2 317 aa20.16■□□□□ 0.82
SNHG17-207ENST00000449469 R3HCC1Q9Y3T6 440 aaKnown RBP20.16■□□□□ 0.82
SNHG17-207ENST00000449469 SASS6Q6UVJ0 657 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 RFX7Q2KHR2 1363 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 JCADQ9P266 1359 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 ELP1O95163 1332 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 DYNC1I1O14576 645 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 CREB3L3Q68CJ9 461 aa20.15■□□□□ 0.82
SNHG17-207ENST00000449469 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
SNHG17-207ENST00000449469 MST1RQ04912 1400 aa20.14■□□□□ 0.82
SNHG17-207ENST00000449469 GCP02774 474 aa20.14■□□□□ 0.81
SNHG17-207ENST00000449469 ANXA1P04083 346 aa20.14■□□□□ 0.81
SNHG17-207ENST00000449469 TPM3P06753 285 aa20.14■□□□□ 0.81
SNHG17-207ENST00000449469 FOXD4L6Q3SYB3 417 aaPredicted RBP20.14■□□□□ 0.81
SNHG17-207ENST00000449469 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
SNHG17-207ENST00000449469 FOXD4L3Q6VB84 417 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms