RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
SKIDA1-202ENST00000449193 CCDC152Q4G0S7 254 aa20.54■□□□□ 0.88
SKIDA1-202ENST00000449193 FAM193AP78312 1265 aa20.54■□□□□ 0.88
SKIDA1-202ENST00000449193 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 MCM4P33991 863 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 STXBP4Q6ZWJ1 553 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 UQCRFS1P1P0C7P4 283 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 AMPD3Q01432 767 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 GOLIM4O00461 696 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 LIMCH1Q9UPQ0 1083 aa20.53■□□□□ 0.88
SKIDA1-202ENST00000449193 SFPQP23246 707 aaKnown RBP eCLIP20.52■□□□□ 0.88
SKIDA1-202ENST00000449193 TTC21AQ8NDW8 1320 aa20.52■□□□□ 0.88
SKIDA1-202ENST00000449193 TOM1O60784 492 aa20.52■□□□□ 0.88
SKIDA1-202ENST00000449193 ZSCAN12O43309 604 aa20.52■□□□□ 0.88
SKIDA1-202ENST00000449193 GUCY1B3Q02153 619 aa20.52■□□□□ 0.88
SKIDA1-202ENST00000449193 CTAGE5O15320 804 aa20.52■□□□□ 0.87
SKIDA1-202ENST00000449193 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.87
SKIDA1-202ENST00000449193 ATP5J2-PTCD1G3V325 749 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 CRNKL1Q9BZJ0 848 aaKnown RBP20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 MFSD6Q6ZSS7 791 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 UBE3BQ7Z3V4 1068 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 CNNM3Q8NE01 707 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 LIG1P18858 919 aa20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 PYM1Q9BRP8 204 aaKnown RBP20.51■□□□□ 0.87
SKIDA1-202ENST00000449193 CCDC91Q7Z6B0 441 aa20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 NOS1P29475 1434 aa20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 KIF2AO00139 706 aaPredicted RBP20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 ACEP12821 1306 aa20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 GBP3Q9H0R5 595 aa20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 HDAC9Q9UKV0 1011 aa20.5■□□□□ 0.87
SKIDA1-202ENST00000449193 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 CCDC183Q5T5S1 534 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 DRC1Q96MC2 740 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 VAT1LQ9HCJ6 419 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 PPM1FP49593 454 aaPredicted RBP20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 TRAF1Q13077 416 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 FERMT2Q96AC1 680 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 TNRQ92752 1358 aa20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
SKIDA1-202ENST00000449193 ABCC5O15440 1437 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 SYCE3A1L190 88 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 CCT2P78371 535 aaKnown RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 KIF5CO60282 957 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 USO1O60763 962 aaKnown RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 SNRKQ9NRH2 765 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 NCOA7Q8NI08 942 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 LRRC27Q9C0I9 530 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 SAMM50Q9Y512 469 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 USP16Q9Y5T5 823 aa20.48■□□□□ 0.87
SKIDA1-202ENST00000449193 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 FANCAO15360 1455 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 UBXN4Q92575 508 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 ANKRD13DQ6ZTN6 518 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 TAF3Q5VWG9 929 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
SKIDA1-202ENST00000449193 CUL7Q14999 1698 aa20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 NPHP3Q7Z494 1330 aa20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 TDRD12Q587J7 1177 aaKnown RBP20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 UBAP1LF5GYI3 381 aa20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 YEATS4O95619 227 aa20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 HMG20BQ9P0W2 317 aa20.46■□□□□ 0.87
SKIDA1-202ENST00000449193 MTIF2P46199 727 aaKnown RBP20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 CCDC40Q4G0X9 1142 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 CRACR2AQ9BSW2 395 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 DHX29Q7Z478 1369 aaKnown RBP20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 GSTTP1A0A1W2PQM5 241 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 IDEP14735 1019 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 HOOK3Q86VS8 718 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 SYCP3Q8IZU3 236 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 LUZP1Q86V48 1076 aa20.45■□□□□ 0.86
SKIDA1-202ENST00000449193 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 UBA7P41226 1012 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 PLCD4Q9BRC7 762 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 ATP6V1AP38606 617 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 FAM114A1Q8IWE2 563 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 CTNNBL1Q8WYA6 563 aaPredicted RBP20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 CTNNA2P26232 953 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 FSIP1Q8NA03 581 aa20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.44■□□□□ 0.86
SKIDA1-202ENST00000449193 TCERG1LQ5VWI1 586 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms