RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 UBR3Q6ZT12 1888 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 ADCY9O60503 1353 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
SHANK2-210ENST00000449116 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 PHF14O94880 888 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 MS4A1P11836 297 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 TBC1D2BQ9UPU7 963 aa18.61■□□□□ 0.57
SHANK2-210ENST00000449116 MAP3K15Q6ZN16 1313 aa18.6■□□□□ 0.57
SHANK2-210ENST00000449116 F6X3S4 739 aa18.6■□□□□ 0.57
SHANK2-210ENST00000449116 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
SHANK2-210ENST00000449116 DNAAF4Q8WXU2 420 aa18.6■□□□□ 0.57
SHANK2-210ENST00000449116 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
SHANK2-210ENST00000449116 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
SHANK2-210ENST00000449116 ERVV-1B6SEH8 477 aa18.59■□□□□ 0.57
SHANK2-210ENST00000449116 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
SHANK2-210ENST00000449116 DZIP1LQ8IYY4 767 aaKnown RBP18.59■□□□□ 0.57
SHANK2-210ENST00000449116 FLAD1Q8NFF5 587 aa18.59■□□□□ 0.57
SHANK2-210ENST00000449116 ZBTB3Q9H5J0 574 aa18.59■□□□□ 0.57
SHANK2-210ENST00000449116 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
SHANK2-210ENST00000449116 TNNQ9UQP3 1299 aa18.59■□□□□ 0.57
SHANK2-210ENST00000449116 ABCC4O15439 1325 aa18.58■□□□□ 0.57
SHANK2-210ENST00000449116 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
SHANK2-210ENST00000449116 RFC4P35249 363 aa18.58■□□□□ 0.56
SHANK2-210ENST00000449116 PDE3AQ14432 1141 aa18.58■□□□□ 0.56
SHANK2-210ENST00000449116 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
SHANK2-210ENST00000449116 PXDNLA1KZ92 1463 aa18.58■□□□□ 0.56
SHANK2-210ENST00000449116 RGL2O15211 777 aa18.57■□□□□ 0.56
SHANK2-210ENST00000449116 ZPR1O75312 459 aa18.57■□□□□ 0.56
SHANK2-210ENST00000449116 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
SHANK2-210ENST00000449116 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
SHANK2-210ENST00000449116 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 GIGYF2Q6Y7W6 1299 aaKnown RBP18.56■□□□□ 0.56
SHANK2-210ENST00000449116 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
SHANK2-210ENST00000449116 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 RLBP1P12271 317 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 HLFQ16534 295 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 HSP90AB3PQ58FF7 597 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 C20orf194Q5TEA3 1177 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 COL23A1Q86Y22 540 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-210ENST00000449116 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
SHANK2-210ENST00000449116 ZNF652Q9Y2D9 606 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 BCORQ6W2J9 1755 aa18.55■□□□□ 0.56
SHANK2-210ENST00000449116 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
SHANK2-210ENST00000449116 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
SHANK2-210ENST00000449116 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
SHANK2-210ENST00000449116 TMEM57Q8N5G2 664 aa18.54■□□□□ 0.56
SHANK2-210ENST00000449116 MYD88Q99836 296 aa18.54■□□□□ 0.56
SHANK2-210ENST00000449116 TCIRG1Q13488 830 aa18.53■□□□□ 0.56
SHANK2-210ENST00000449116 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
SHANK2-210ENST00000449116 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
SHANK2-210ENST00000449116 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
SHANK2-210ENST00000449116 MSH5O43196 834 aa18.52■□□□□ 0.56
SHANK2-210ENST00000449116 LINS1Q8NG48 757 aa18.52■□□□□ 0.56
SHANK2-210ENST00000449116 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 GYS1P13807 737 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
SHANK2-210ENST00000449116 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 COG6Q9Y2V7 657 aa18.51■□□□□ 0.55
SHANK2-210ENST00000449116 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-210ENST00000449116 NEURL1BA8MQ27 555 aa18.5■□□□□ 0.55
SHANK2-210ENST00000449116 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
SHANK2-210ENST00000449116 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
SHANK2-210ENST00000449116 ZNF34Q8IZ26 560 aa18.5■□□□□ 0.55
SHANK2-210ENST00000449116 NUP98P52948 1817 aa18.5■□□□□ 0.55
SHANK2-210ENST00000449116 NEFLP07196 543 aa18.49■□□□□ 0.55
SHANK2-210ENST00000449116 CWF19L2Q2TBE0 894 aaKnown RBP18.49■□□□□ 0.55
SHANK2-210ENST00000449116 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
SHANK2-210ENST00000449116 IBTKQ9P2D0 1353 aaPredicted RBP18.49■□□□□ 0.55
SHANK2-210ENST00000449116 ANKRD36CQ5JPF3 1778 aa18.48■□□□□ 0.55
SHANK2-210ENST00000449116 GPTP24298 496 aa18.48■□□□□ 0.55
SHANK2-210ENST00000449116 IRX6P78412 446 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-210ENST00000449116 FKBP8Q14318 412 aa18.48■□□□□ 0.55
SHANK2-210ENST00000449116 CCDC191Q8NCU4 936 aa18.48■□□□□ 0.55
SHANK2-210ENST00000449116 CRBNQ96SW2 442 aa18.48■□□□□ 0.55
SHANK2-210ENST00000449116 CWC25Q9NXE8 425 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-210ENST00000449116 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHANK2-210ENST00000449116 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
SHANK2-210ENST00000449116 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
SHANK2-210ENST00000449116 NLRP10Q86W26 655 aa18.47■□□□□ 0.55
SHANK2-210ENST00000449116 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
SHANK2-210ENST00000449116 GCKRQ14397 625 aa18.46■□□□□ 0.55
SHANK2-210ENST00000449116 R3HDM1Q15032 1099 aaKnown RBP18.46■□□□□ 0.55
SHANK2-210ENST00000449116 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
SHANK2-210ENST00000449116 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
SHANK2-210ENST00000449116 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
SHANK2-210ENST00000449116 SLC16A10Q8TF71 515 aa18.45■□□□□ 0.54
SHANK2-210ENST00000449116 CHMP4BQ9H444 224 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms