RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GNPATO15228 680 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 NEFLP07196 543 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 AK7Q96M32 723 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 ATP10DQ9P241 1426 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-203ENST00000449049 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
SHMT2-203ENST00000449049 C4AP0C0L4 1744 aa17.83■□□□□ 0.45
SHMT2-203ENST00000449049 INTS3Q68E01 1043 aaKnown RBP17.83■□□□□ 0.45
SHMT2-203ENST00000449049 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.45
SHMT2-203ENST00000449049 RIC3Q7Z5B4 369 aa17.83■□□□□ 0.45
SHMT2-203ENST00000449049 DEFB132Q7Z7B7 95 aa17.83■□□□□ 0.45
SHMT2-203ENST00000449049 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.45
SHMT2-203ENST00000449049 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
SHMT2-203ENST00000449049 A0A087WZG4 1122 aa17.83■□□□□ 0.44
SHMT2-203ENST00000449049 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
SHMT2-203ENST00000449049 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
SHMT2-203ENST00000449049 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
SHMT2-203ENST00000449049 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
SHMT2-203ENST00000449049 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.444e-7■■■■□ 25.7
SHMT2-203ENST00000449049 TUBGCP6Q96RT7 1819 aa17.82■□□□□ 0.44
SHMT2-203ENST00000449049 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
SHMT2-203ENST00000449049 MVPQ14764 893 aaKnown RBP17.81■□□□□ 0.44
SHMT2-203ENST00000449049 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 CRBNQ96SW2 442 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 ADRA2BP18089 450 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-203ENST00000449049 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
SHMT2-203ENST00000449049 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 QSER1Q2KHR3 1735 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 SSFA2P28290 1259 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 ITPRIPQ8IWB1 547 aa17.8■□□□□ 0.44
SHMT2-203ENST00000449049 IBTKQ9P2D0 1353 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-203ENST00000449049 RGL2O15211 777 aa17.79■□□□□ 0.44
SHMT2-203ENST00000449049 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
SHMT2-203ENST00000449049 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
SHMT2-203ENST00000449049 NUP98P52948 1817 aa17.79■□□□□ 0.44
SHMT2-203ENST00000449049 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
SHMT2-203ENST00000449049 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 FKBP8Q14318 412 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 TRAPPC3LQ5T215 181 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 LINS1Q8NG48 757 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
SHMT2-203ENST00000449049 ARXQ96QS3 562 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 DDX19BQ9UMR2 479 aa17.78■□□□□ 0.44
SHMT2-203ENST00000449049 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
SHMT2-203ENST00000449049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.77■□□□□ 0.44
SHMT2-203ENST00000449049 NEXNQ0ZGT2 675 aa17.77■□□□□ 0.44
SHMT2-203ENST00000449049 HLFQ16534 295 aa17.77■□□□□ 0.44
SHMT2-203ENST00000449049 EXOC6Q8TAG9 804 aa17.77■□□□□ 0.44
SHMT2-203ENST00000449049 MYD88Q99836 296 aa17.77■□□□□ 0.44
SHMT2-203ENST00000449049 NARFQ9UHQ1 456 aa17.77■□□□□ 0.44
SHMT2-203ENST00000449049 ALDH1L1O75891 902 aa17.77■□□□□ 0.43
SHMT2-203ENST00000449049 PHF14O94880 888 aa17.77■□□□□ 0.43
SHMT2-203ENST00000449049 IGKV5-2P06315 115 aa17.77■□□□□ 0.43
SHMT2-203ENST00000449049 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.43
SHMT2-203ENST00000449049 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
SHMT2-203ENST00000449049 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
SHMT2-203ENST00000449049 TFCP2L1Q9NZI6 479 aa17.76■□□□□ 0.43
SHMT2-203ENST00000449049 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
SHMT2-203ENST00000449049 USP42Q9H9J4 1324 aaKnown RBP17.75■□□□□ 0.43
SHMT2-203ENST00000449049 NEURL1BA8MQ27 555 aa17.75■□□□□ 0.43
SHMT2-203ENST00000449049 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-203ENST00000449049 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
SHMT2-203ENST00000449049 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
SHMT2-203ENST00000449049 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
SHMT2-203ENST00000449049 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
SHMT2-203ENST00000449049 RFC4P35249 363 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 FLAD1Q8NFF5 587 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 STK32BQ9NY57 414 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
SHMT2-203ENST00000449049 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
SHMT2-203ENST00000449049 BCL2L12Q9HB09 334 aa17.74■□□□□ 0.43
SHMT2-203ENST00000449049 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
SHMT2-203ENST00000449049 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
SHMT2-203ENST00000449049 ZPR1O75312 459 aa17.73■□□□□ 0.43
SHMT2-203ENST00000449049 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
SHMT2-203ENST00000449049 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 AAMPQ13685 434 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 GCKRQ14397 625 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 CCDC191Q8NCU4 936 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 MEIS3Q99687 375 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
SHMT2-203ENST00000449049 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
SHMT2-203ENST00000449049 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
SHMT2-203ENST00000449049 UTYO14607 1347 aa17.71■□□□□ 0.43
SHMT2-203ENST00000449049 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.42
SHMT2-203ENST00000449049 UBN2Q6ZU65 1347 aa17.7■□□□□ 0.42
SHMT2-203ENST00000449049 GNAI3P08754 354 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms