RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CPDO75976 1380 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 CDC45O75419 566 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 GTF2F1P35269 517 aaKnown RBP eCLIP6.58□□□□□ -1.36
LMO3-209ENST00000447609 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 CHRDL2Q6WN34 429 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 ITPRIPQ8IWB1 547 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 PHACTR3Q96KR7 559 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 ARID3AQ99856 593 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 TMX4Q9H1E5 349 aaPredicted RBP6.58□□□□□ -1.36
LMO3-209ENST00000447609 RNMTO43148 476 aaKnown RBP6.58□□□□□ -1.36
LMO3-209ENST00000447609 MYL6BP14649 208 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 ZSCAN20P17040 1043 aaPredicted RBP6.58□□□□□ -1.36
LMO3-209ENST00000447609 FAM193AP78312 1265 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
LMO3-209ENST00000447609 HDGFL1Q5TGJ6 251 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 CREBRFQ8IUR6 639 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 SMC4Q9NTJ3 1288 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 OVOS2A0A0J9YW53 1432 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 OVOS2Q6IE36 1432 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 PXDNQ92626 1479 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 PDIA4P13667 645 aaKnown RBP6.57□□□□□ -1.36
LMO3-209ENST00000447609 PHKG2P15735 406 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 BARGINQ6ZT62 677 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
LMO3-209ENST00000447609 IPO4Q8TEX9 1081 aaKnown RBP6.57□□□□□ -1.36
LMO3-209ENST00000447609 ADGRB2O60241 1585 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 ZPR1O75312 459 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 DDX58O95786 925 aaKnown RBP6.57□□□□□ -1.36
LMO3-209ENST00000447609 KIF6Q6ZMV9 814 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 BICDL1Q6ZP65 573 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 RBSNQ9H1K0 784 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 IGSF1Q8N6C5 1336 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 STRCP1A6NGW2 1772 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 NUCB1Q02818 461 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 NEXNQ0ZGT2 675 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 TAF7LQ5H9L4 462 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 RIC3Q7Z5B4 369 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 PIBF1Q8WXW3 757 aa6.57□□□□□ -1.36
LMO3-209ENST00000447609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.57□□□□□ -1.36
LMO3-209ENST00000447609 RFC4P35249 363 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 MCM2P49736 904 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 CBX1P83916 185 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
LMO3-209ENST00000447609 CHD1LQ86WJ1 897 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
LMO3-209ENST00000447609 BCL2L13Q9BXK5 485 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
LMO3-209ENST00000447609 RGPD8O14715 1765 aaPredicted RBP6.56□□□□□ -1.36
LMO3-209ENST00000447609 MAP3K5Q99683 1374 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 NAP1L2Q9ULW6 460 aaPredicted RBP6.56□□□□□ -1.36
LMO3-209ENST00000447609 CHMP3Q9Y3E7 222 aa6.56□□□□□ -1.36
LMO3-209ENST00000447609 FKBP5Q13451 457 aaPredicted RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 ATF7IPQ6VMQ6 1270 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 ZNF428Q96B54 188 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 LMBRD1Q9NUN5 540 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 OGFRQ9NZT2 677 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 RTCBQ9Y3I0 505 aaKnown RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 GNPATO15228 680 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
LMO3-209ENST00000447609 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 DEFB132Q7Z7B7 95 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 MARCH10Q8NA82 808 aaPredicted RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 ERVV-2B6SEH9 535 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 CYP27B1O15528 508 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 KCNQ2O43526 872 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 HTATSF1O43719 755 aaKnown RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 SNRPA1P09661 255 aaKnown RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 RLBP1P12271 317 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 KCNQ4P56696 695 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 SYCP1Q15431 976 aa6.55□□□□□ -1.36
LMO3-209ENST00000447609 TWISTNBQ3B726 338 aaPredicted RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 DNAJC2Q99543 621 aaKnown RBP6.55□□□□□ -1.36
LMO3-209ENST00000447609 EXOSC9Q06265 439 aaKnown RBP6.54□□□□□ -1.36
LMO3-209ENST00000447609 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
LMO3-209ENST00000447609 SLC52A2Q9HAB3 445 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 CALCOCO1Q9P1Z2 691 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
LMO3-209ENST00000447609 CD163L1Q9NR16 1453 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 SETD1AO15047 1707 aaKnown RBP6.54□□□□□ -1.36
LMO3-209ENST00000447609 REC8O95072 547 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 POLD1P28340 1107 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 AHDC1Q5TGY3 1603 aaPredicted RBP6.54□□□□□ -1.36
LMO3-209ENST00000447609 MCCP23508 829 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 ASAP1Q9ULH1 1129 aa6.54□□□□□ -1.36
LMO3-209ENST00000447609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
LMO3-209ENST00000447609 CDK12Q9NYV4 1490 aaPredicted RBP6.53□□□□□ -1.36
LMO3-209ENST00000447609 OVOS2A0A0G2JMS6 1433 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 IL16Q14005 1332 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 SYCE3A1L190 88 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 DNAJC10Q8IXB1 793 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 ZNF652Q9Y2D9 606 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 MED1Q15648 1581 aaPredicted RBP6.53□□□□□ -1.36
LMO3-209ENST00000447609 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 PIP4K2AP48426 406 aaPredicted RBP6.53□□□□□ -1.36
LMO3-209ENST00000447609 SIK1P57059 783 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
LMO3-209ENST00000447609 ANKRD45Q5TZF3 282 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms