RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CNPY2Q9Y2B0 182 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 SMTNL1A8MU46 457 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 F13A1P00488 732 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 ATP2B1P20020 1258 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
TCOF1-206ENST00000445265 TFIP11Q9UBB9 837 aaKnown RBP19.53■□□□□ 0.72
TCOF1-206ENST00000445265 RBM8AQ9Y5S9 174 aaKnown RBP19.53■□□□□ 0.72
TCOF1-206ENST00000445265 KDM4AO75164 1064 aa19.53■□□□□ 0.72
TCOF1-206ENST00000445265 DACH1Q9UI36 760 aa19.53■□□□□ 0.72
TCOF1-206ENST00000445265 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
TCOF1-206ENST00000445265 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
TCOF1-206ENST00000445265 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
TCOF1-206ENST00000445265 DYNC1I1O14576 645 aa19.52■□□□□ 0.72
TCOF1-206ENST00000445265 AOX1Q06278 1338 aa19.52■□□□□ 0.72
TCOF1-206ENST00000445265 ZNF445P59923 1031 aa19.52■□□□□ 0.72
TCOF1-206ENST00000445265 KIF2AO00139 706 aaPredicted RBP19.52■□□□□ 0.71
TCOF1-206ENST00000445265 GRM8O00222 908 aa19.52■□□□□ 0.71
TCOF1-206ENST00000445265 FILIP1LQ4L180 1135 aa19.52■□□□□ 0.71
TCOF1-206ENST00000445265 PCMTD1Q96MG8 357 aaPredicted RBP19.52■□□□□ 0.71
TCOF1-206ENST00000445265 SBNO1A3KN83 1393 aa19.52■□□□□ 0.71
TCOF1-206ENST00000445265 PDCL2Q8N4E4 241 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 PRIMPOLQ96LW4 560 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 LINS1Q8NG48 757 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 STRN4Q9NRL3 753 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 CCDC69A6NI79 296 aa19.51■□□□□ 0.71
TCOF1-206ENST00000445265 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
TCOF1-206ENST00000445265 AK2P54819 239 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 ANKRD24Q8TF21 1146 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 MAP3K4Q9Y6R4 1608 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 LAMC1P11047 1609 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 ZSCAN16Q9H4T2 348 aaPredicted RBP19.5■□□□□ 0.71
TCOF1-206ENST00000445265 OFD1O75665 1012 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 GSPT1P15170 499 aaKnown RBP19.5■□□□□ 0.71
TCOF1-206ENST00000445265 ZNF165P49910 485 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 NECAB1Q8N987 351 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 CLIP2Q9UDT6 1046 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 MLH3Q9UHC1 1453 aa19.5■□□□□ 0.71
TCOF1-206ENST00000445265 CFAP74Q9C0B2 1584 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 NEMFO60524 1076 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 SIRT1Q96EB6 747 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 C8orf76Q96K31 380 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 CLTCL1P53675 1640 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 NOC3LQ8WTT2 800 aaKnown RBP19.49■□□□□ 0.71
TCOF1-206ENST00000445265 UBE3BQ7Z3V4 1068 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
TCOF1-206ENST00000445265 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
TCOF1-206ENST00000445265 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 HOXC9P31274 260 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 WASF1Q92558 559 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 VPS53Q5VIR6 699 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
TCOF1-206ENST00000445265 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 EPB41L2O43491 1005 aaKnown RBP19.48■□□□□ 0.71
TCOF1-206ENST00000445265 PTPN14Q15678 1187 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 ACBD3Q9H3P7 528 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 AATKQ6ZMQ8 1374 aa19.48■□□□□ 0.71
TCOF1-206ENST00000445265 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 HOXB7P09629 217 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 SNRPA1P09661 255 aaKnown RBP19.47■□□□□ 0.71
TCOF1-206ENST00000445265 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 SMARCE1Q969G3 411 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
TCOF1-206ENST00000445265 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
TCOF1-206ENST00000445265 DNM1Q05193 864 aaKnown RBP19.47■□□□□ 0.71
TCOF1-206ENST00000445265 EFCAB6Q5THR3 1501 aa19.47■□□□□ 0.71
TCOF1-206ENST00000445265 MPHOSPH8Q99549 860 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 PHAXQ9H814 394 aaKnown RBP19.46■□□□□ 0.71
TCOF1-206ENST00000445265 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 PLEKHG3A1L390 1219 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 IDH1O75874 414 aaKnown RBP19.46■□□□□ 0.71
TCOF1-206ENST00000445265 METTL24Q5JXM2 366 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 STX1AQ16623 288 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 RBSNQ9H1K0 784 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 LMBRD1Q9NUN5 540 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 G3V3G9 751 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
TCOF1-206ENST00000445265 DCAF8Q5TAQ9 597 aa19.46■□□□□ 0.71
TCOF1-206ENST00000445265 RAD50Q92878 1312 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 GOLIM4O00461 696 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 FSIP1Q8NA03 581 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 FAM177BA6PVY3 158 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 TXLNAP40222 546 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 FAM135BQ49AJ0 1406 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 RBM33Q96EV2 1170 aaKnown RBP19.45■□□□□ 0.7
TCOF1-206ENST00000445265 USP19O94966 1318 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 SYT1P21579 422 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 NOLC1Q14978 699 aaKnown RBP eCLIP19.45■□□□□ 0.7
TCOF1-206ENST00000445265 PA2G4Q9UQ80 394 aaKnown RBP19.45■□□□□ 0.7
TCOF1-206ENST00000445265 ARHGEF10O15013 1369 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
TCOF1-206ENST00000445265 STARD3NLO95772 234 aa19.44■□□□□ 0.7
TCOF1-206ENST00000445265 SLC3A2P08195 630 aaKnown RBP19.44■□□□□ 0.7
TCOF1-206ENST00000445265 AIDAQ96BJ3 306 aa19.44■□□□□ 0.7
TCOF1-206ENST00000445265 ATP7BP35670 1465 aa19.44■□□□□ 0.7
TCOF1-206ENST00000445265 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms