RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
USP6NL-203ENST00000443016 PDE6BP35913 854 aa11.48□□□□□ -0.57
USP6NL-203ENST00000443016 TTLL6Q8N841 843 aa11.48□□□□□ -0.57
USP6NL-203ENST00000443016 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
USP6NL-203ENST00000443016 ADCY9O60503 1353 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 ST5P78524 1137 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 PRR5LQ6MZQ0 368 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 NBPF10Q6P3W6 841 aaKnown RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 ZNF622Q969S3 477 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 BRIP1Q9BX63 1249 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 KIAA1551Q9HCM1 1747 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
USP6NL-203ENST00000443016 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-203ENST00000443016 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-203ENST00000443016 NIP7Q9Y221 180 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP6NL-203ENST00000443016 MYL6BP14649 208 aa11.46□□□□□ -0.58
USP6NL-203ENST00000443016 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.58
USP6NL-203ENST00000443016 RNF181Q9P0P0 153 aa11.46□□□□□ -0.58
USP6NL-203ENST00000443016 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.58
USP6NL-203ENST00000443016 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 AFDNP55196 1824 aaKnown RBP11.45□□□□□ -0.58
USP6NL-203ENST00000443016 FAM177BA6PVY3 158 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 KIF6Q6ZMV9 814 aa11.45□□□□□ -0.58
USP6NL-203ENST00000443016 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
USP6NL-203ENST00000443016 SCN7AQ01118 1682 aa11.44□□□□□ -0.58
USP6NL-203ENST00000443016 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
USP6NL-203ENST00000443016 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-203ENST00000443016 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
USP6NL-203ENST00000443016 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
USP6NL-203ENST00000443016 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
USP6NL-203ENST00000443016 HLFQ16534 295 aa11.43□□□□□ -0.58
USP6NL-203ENST00000443016 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
USP6NL-203ENST00000443016 C21orf2O43822 256 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 RASSF7Q02833 373 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 RGL2O15211 777 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 LMNB1P20700 586 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 TTLL7Q6ZT98 887 aa11.42□□□□□ -0.58
USP6NL-203ENST00000443016 MAP3K15Q6ZN16 1313 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 ERVV-1B6SEH8 477 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 SRGNP10124 158 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 MASTLQ96GX5 879 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 KDM3BQ7LBC6 1761 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 NMRK2Q9NPI5 230 aa11.41□□□□□ -0.58
USP6NL-203ENST00000443016 GPTP24298 496 aa11.4□□□□□ -0.58
USP6NL-203ENST00000443016 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
USP6NL-203ENST00000443016 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
USP6NL-203ENST00000443016 C16orf71Q8IYS4 520 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-203ENST00000443016 NYXQ9GZU5 481 aa11.4□□□□□ -0.58
USP6NL-203ENST00000443016 KIF3CO14782 793 aa11.4□□□□□ -0.59
USP6NL-203ENST00000443016 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.59
USP6NL-203ENST00000443016 BCORQ6W2J9 1755 aa11.39□□□□□ -0.59
USP6NL-203ENST00000443016 ANXA1P04083 346 aa11.39□□□□□ -0.59
USP6NL-203ENST00000443016 LAMB4A4D0S4 1761 aa11.39□□□□□ -0.59
USP6NL-203ENST00000443016 NFKBIEO00221 500 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 CHL1O00533 1208 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 APAF1O14727 1248 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 TOMM70O94826 608 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 NPR1P16066 1061 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 AIMP1Q12904 312 aaKnown RBP11.38□□□□□ -0.59
USP6NL-203ENST00000443016 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 MIER1Q8N108 512 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 TAOK3Q9H2K8 898 aa11.38□□□□□ -0.59
USP6NL-203ENST00000443016 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
USP6NL-203ENST00000443016 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
USP6NL-203ENST00000443016 CCER2I3L3R5 266 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 ALDH1B1P30837 517 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 PROSER3Q2NL68 480 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 DLEC1Q9Y238 1755 aa11.37□□□□□ -0.59
USP6NL-203ENST00000443016 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
USP6NL-203ENST00000443016 PDIA6Q15084 440 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 HSPA6P17066 643 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
USP6NL-203ENST00000443016 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms