RNA–Protein interactions for RNA: ENST00000441383.5

GACAT1-202, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-202ENST00000441383 CHRNA4P43681 627 aa10.07□□□□□ -0.8
GACAT1-202ENST00000441383 LAMC2Q13753 1193 aa10.07□□□□□ -0.8
GACAT1-202ENST00000441383 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
GACAT1-202ENST00000441383 USP17L1Q7RTZ2 530 aa10.07□□□□□ -0.8
GACAT1-202ENST00000441383 SERTM1A2A2V5 107 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
GACAT1-202ENST00000441383 HDGFL1Q5TGJ6 251 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 CCDC102BQ68D86 513 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 TRIM11Q96F44 468 aa10.06□□□□□ -0.8
GACAT1-202ENST00000441383 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
GACAT1-202ENST00000441383 SFSWAPQ12872 951 aaKnown RBP10.05□□□□□ -0.8
GACAT1-202ENST00000441383 MDFIQ99750 246 aa10.05□□□□□ -0.8
GACAT1-202ENST00000441383 TSPAN10Q9H1Z9 355 aaPredicted RBP10.05□□□□□ -0.8
GACAT1-202ENST00000441383 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
GACAT1-202ENST00000441383 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
GACAT1-202ENST00000441383 ELOA3DA6NLF2 546 aaPredicted RBP10.03□□□□□ -0.8
GACAT1-202ENST00000441383 FLIIQ13045 1269 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 ELOA3BQ3SY89 546 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 ELOA3Q8NG57 546 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 PLVAPQ9BX97 442 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 NEUROD4Q9HD90 331 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
GACAT1-202ENST00000441383 ATP9BO43861 1147 aa10.02□□□□□ -0.81
GACAT1-202ENST00000441383 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
GACAT1-202ENST00000441383 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
GACAT1-202ENST00000441383 GPC6Q9Y625 555 aaPredicted RBP10.02□□□□□ -0.81
GACAT1-202ENST00000441383 PSMA6P60900 246 aaKnown RBP10.01□□□□□ -0.81
GACAT1-202ENST00000441383 HSH2DQ96JZ2 352 aa10.01□□□□□ -0.81
GACAT1-202ENST00000441383 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
GACAT1-202ENST00000441383 SIN3BO75182 1162 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 DKK1O94907 266 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 XP32Q5T750 250 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 POTEAQ6S8J7 498 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
GACAT1-202ENST00000441383 PHACTR1Q9C0D0 580 aa10□□□□□ -0.81
GACAT1-202ENST00000441383 SFI1A8K8P3 1242 aa9.99□□□□□ -0.81
GACAT1-202ENST00000441383 ALAS2P22557 587 aa9.99□□□□□ -0.81
GACAT1-202ENST00000441383 RAB44Q7Z6P3 723 aaPredicted RBP9.99□□□□□ -0.81
GACAT1-202ENST00000441383 ZNF280CQ8ND82 737 aa9.99□□□□□ -0.81
GACAT1-202ENST00000441383 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
GACAT1-202ENST00000441383 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
GACAT1-202ENST00000441383 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
GACAT1-202ENST00000441383 M0R2N6 131 aa9.98□□□□□ -0.81
GACAT1-202ENST00000441383 HIRAP54198 1017 aaPredicted RBP9.98□□□□□ -0.81
GACAT1-202ENST00000441383 C1orf53Q5VUE5 145 aa9.98□□□□□ -0.81
GACAT1-202ENST00000441383 STARD13Q9Y3M8 1113 aa9.98□□□□□ -0.81
GACAT1-202ENST00000441383 C21orf2O43822 256 aa9.97□□□□□ -0.81
GACAT1-202ENST00000441383 SPEM2Q0P670 501 aa9.97□□□□□ -0.81
GACAT1-202ENST00000441383 SIX5Q8N196 739 aa9.97□□□□□ -0.81
GACAT1-202ENST00000441383 CEP63Q96MT8 703 aa9.97□□□□□ -0.81
GACAT1-202ENST00000441383 BRD7Q9NPI1 651 aa9.97□□□□□ -0.81
GACAT1-202ENST00000441383 COL9A3Q14050 684 aaPredicted RBP9.96□□□□□ -0.82
GACAT1-202ENST00000441383 DOC2BQ14184 412 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 C8orf86Q6ZUL3 223 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 SUSD3Q96L08 255 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.82
GACAT1-202ENST00000441383 M0R082 166 aa9.95□□□□□ -0.82
GACAT1-202ENST00000441383 PPP1R12BO60237 982 aaPredicted RBP9.95□□□□□ -0.82
GACAT1-202ENST00000441383 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
GACAT1-202ENST00000441383 ZNF417Q8TAU3 575 aa9.95□□□□□ -0.82
GACAT1-202ENST00000441383 ZNF587Q96SQ5 575 aaPredicted RBP9.95□□□□□ -0.82
GACAT1-202ENST00000441383 ALBP02768 609 aa9.94□□□□□ -0.82
GACAT1-202ENST00000441383 ITGB7P26010 798 aa9.94□□□□□ -0.82
GACAT1-202ENST00000441383 TYRO3Q06418 890 aa9.94□□□□□ -0.82
GACAT1-202ENST00000441383 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
GACAT1-202ENST00000441383 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 KCNQ4P56696 695 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 ALDH16A1Q8IZ83 802 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 FNBP4Q8N3X1 1017 aaPredicted RBP9.93□□□□□ -0.82
GACAT1-202ENST00000441383 GLMNQ92990 594 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 ANKIB1Q9P2G1 1089 aa9.93□□□□□ -0.82
GACAT1-202ENST00000441383 ATAD2Q6PL18 1390 aa9.92□□□□□ -0.82
GACAT1-202ENST00000441383 ADH7P40394 386 aa9.92□□□□□ -0.82
GACAT1-202ENST00000441383 C2orf49Q9BVC5 232 aaPredicted RBP9.92□□□□□ -0.82
GACAT1-202ENST00000441383 KCNH4Q9UQ05 1017 aa9.92□□□□□ -0.82
GACAT1-202ENST00000441383 RASA1P20936 1047 aa9.91□□□□□ -0.82
GACAT1-202ENST00000441383 GATA4P43694 442 aa9.91□□□□□ -0.82
GACAT1-202ENST00000441383 SCG3Q8WXD2 468 aaKnown RBP9.91□□□□□ -0.82
GACAT1-202ENST00000441383 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
GACAT1-202ENST00000441383 MAFBQ9Y5Q3 323 aaPredicted RBP9.91□□□□□ -0.82
GACAT1-202ENST00000441383 CHMP7Q8WUX9 453 aaPredicted RBP9.9□□□□□ -0.82
GACAT1-202ENST00000441383 NGLY1Q96IV0 654 aa9.9□□□□□ -0.82
GACAT1-202ENST00000441383 RBM19Q9Y4C8 960 aaKnown RBP9.9□□□□□ -0.82
GACAT1-202ENST00000441383 LGR5O75473 907 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 PRRT3Q5FWE3 981 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 C20orf204Q6ZNR8 217 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
GACAT1-202ENST00000441383 Q8N3U1 123 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 STAG2Q8N3U4 1231 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
GACAT1-202ENST00000441383 BHMTQ93088 406 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms