RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SRGNP10124 158 aa27.48■■□□□ 1.99
CPNE1-219ENST00000440240 VEGFAP15692 232 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-219ENST00000440240 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
CPNE1-219ENST00000440240 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
CPNE1-219ENST00000440240 MIS18AQ9NYP9 233 aa27.48■■□□□ 1.99
CPNE1-219ENST00000440240 TPTE2Q6XPS3 522 aa27.47■■□□□ 1.99
CPNE1-219ENST00000440240 MASTLQ96GX5 879 aa27.47■■□□□ 1.99
CPNE1-219ENST00000440240 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
CPNE1-219ENST00000440240 ZNF219Q9P2Y4 722 aaPredicted RBP27.47■■□□□ 1.99
CPNE1-219ENST00000440240 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
CPNE1-219ENST00000440240 DNAJC5GQ8N7S2 189 aa27.46■■□□□ 1.99
CPNE1-219ENST00000440240 ANKRD31Q8N7Z5 1873 aa27.45■■□□□ 1.99
CPNE1-219ENST00000440240 SOGA3Q5TF21 947 aa27.45■■□□□ 1.98
CPNE1-219ENST00000440240 SMC1BQ8NDV3 1235 aa27.45■■□□□ 1.98
CPNE1-219ENST00000440240 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
CPNE1-219ENST00000440240 NIP7Q9Y221 180 aaKnown RBP eCLIP27.44■■□□□ 1.98
CPNE1-219ENST00000440240 PRPF40BQ6NWY9 871 aaKnown RBP27.43■■□□□ 1.98
CPNE1-219ENST00000440240 LTBP3Q9NS15 1303 aa27.42■■□□□ 1.98
CPNE1-219ENST00000440240 ERFEQ4G0M1 354 aa27.42■■□□□ 1.98
CPNE1-219ENST00000440240 TAOK3Q9H2K8 898 aa27.42■■□□□ 1.98
CPNE1-219ENST00000440240 TNRC6CQ9HCJ0 1690 aaKnown RBP27.42■■□□□ 1.98
CPNE1-219ENST00000440240 MAPK8IP3Q9UPT6 1336 aa27.41■■□□□ 1.98
CPNE1-219ENST00000440240 BCORQ6W2J9 1755 aa27.4■■□□□ 1.98
CPNE1-219ENST00000440240 KLRG2A4D1S0 409 aaPredicted RBP27.4■■□□□ 1.98
CPNE1-219ENST00000440240 NPR1P16066 1061 aa27.4■■□□□ 1.98
CPNE1-219ENST00000440240 EIF4A1P60842 406 aaKnown RBP27.4■■□□□ 1.98
CPNE1-219ENST00000440240 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-219ENST00000440240 HLFQ16534 295 aa27.38■■□□□ 1.97
CPNE1-219ENST00000440240 IFFO2Q5TF58 517 aa27.38■■□□□ 1.97
CPNE1-219ENST00000440240 ERVV-1B6SEH8 477 aa27.37■■□□□ 1.97
CPNE1-219ENST00000440240 RALBP1Q15311 655 aa27.37■■□□□ 1.97
CPNE1-219ENST00000440240 CCDC88AQ3V6T2 1871 aa27.36■■□□□ 1.97
CPNE1-219ENST00000440240 COL11A2P13942 1736 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-219ENST00000440240 FAM177BA6PVY3 158 aa27.36■■□□□ 1.97
CPNE1-219ENST00000440240 NGEFQ8N5V2 710 aa27.36■■□□□ 1.97
CPNE1-219ENST00000440240 C7orf43Q8WVR3 580 aa27.36■■□□□ 1.97
CPNE1-219ENST00000440240 THUMPD2Q9BTF0 503 aaKnown RBP27.36■■□□□ 1.97
CPNE1-219ENST00000440240 RRP7AQ9Y3A4 280 aaKnown RBP27.36■■□□□ 1.97
CPNE1-219ENST00000440240 FER1L6Q2WGJ9 1857 aa27.34■■□□□ 1.97
CPNE1-219ENST00000440240 CCDC93Q567U6 631 aa27.34■■□□□ 1.97
CPNE1-219ENST00000440240 NYXQ9GZU5 481 aa27.34■■□□□ 1.97
CPNE1-219ENST00000440240 SLX4Q8IY92 1834 aa27.34■■□□□ 1.97
CPNE1-219ENST00000440240 POTECB2RU33 542 aa27.33■■□□□ 1.97
CPNE1-219ENST00000440240 ALDH1B1P30837 517 aa27.33■■□□□ 1.97
CPNE1-219ENST00000440240 HTRA3P83110 453 aa27.33■■□□□ 1.97
CPNE1-219ENST00000440240 KIF6Q6ZMV9 814 aa27.33■■□□□ 1.97
CPNE1-219ENST00000440240 KLRG1Q96E93 195 aa27.33■■□□□ 1.97
CPNE1-219ENST00000440240 MAP3K15Q6ZN16 1313 aa27.32■■□□□ 1.96
CPNE1-219ENST00000440240 DLG5Q8TDM6 1919 aa27.31■■□□□ 1.96
CPNE1-219ENST00000440240 TIAM2Q8IVF5 1701 aa27.31■■□□□ 1.96
CPNE1-219ENST00000440240 MYL6BP14649 208 aa27.31■■□□□ 1.96
CPNE1-219ENST00000440240 WDR90Q96KV7 1748 aa27.3■■□□□ 1.96
CPNE1-219ENST00000440240 RIPK4P57078 832 aa27.3■■□□□ 1.96
CPNE1-219ENST00000440240 RTKN2Q8IZC4 609 aa27.3■■□□□ 1.96
CPNE1-219ENST00000440240 TSPYL4Q9UJ04 414 aa27.3■■□□□ 1.96
CPNE1-219ENST00000440240 ERBB4Q15303 1308 aa27.3■■□□□ 1.96
CPNE1-219ENST00000440240 TTLL7Q6ZT98 887 aa27.29■■□□□ 1.96
CPNE1-219ENST00000440240 BABAM1Q9NWV8 329 aa27.29■■□□□ 1.96
CPNE1-219ENST00000440240 KDM3BQ7LBC6 1761 aa27.29■■□□□ 1.96
CPNE1-219ENST00000440240 DICER1Q9UPY3 1922 aaKnown RBP27.28■■□□□ 1.96
CPNE1-219ENST00000440240 DDNO94850 711 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-219ENST00000440240 FKBP4Q02790 459 aaKnown RBP eCLIP27.28■■□□□ 1.96
CPNE1-219ENST00000440240 LAMB4A4D0S4 1761 aa27.27■■□□□ 1.96
CPNE1-219ENST00000440240 LMOD3Q0VAK6 560 aa27.27■■□□□ 1.96
CPNE1-219ENST00000440240 JMYQ8N9B5 988 aa27.27■■□□□ 1.96
CPNE1-219ENST00000440240 CRY2Q49AN0 593 aa27.26■■□□□ 1.95
CPNE1-219ENST00000440240 ZBTB3Q9H5J0 574 aa27.26■■□□□ 1.95
CPNE1-219ENST00000440240 ARFGEF2Q9Y6D5 1785 aa27.26■■□□□ 1.95
CPNE1-219ENST00000440240 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
CPNE1-219ENST00000440240 NUTM1Q86Y26 1132 aa27.25■■□□□ 1.95
CPNE1-219ENST00000440240 DDX10Q13206 875 aaKnown RBP27.24■■□□□ 1.95
CPNE1-219ENST00000440240 GIGYF2Q6Y7W6 1299 aaKnown RBP27.24■■□□□ 1.95
CPNE1-219ENST00000440240 IQCA1LA6NCM1 817 aa27.23■■□□□ 1.95
CPNE1-219ENST00000440240 GPTP24298 496 aa27.23■■□□□ 1.95
CPNE1-219ENST00000440240 ZNF34Q8IZ26 560 aa27.23■■□□□ 1.95
CPNE1-219ENST00000440240 ZNF277Q9NRM2 450 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-219ENST00000440240 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
CPNE1-219ENST00000440240 EIF2S2P20042 333 aaKnown RBP27.22■■□□□ 1.95
CPNE1-219ENST00000440240 SUSD4Q5VX71 490 aa27.22■■□□□ 1.95
CPNE1-219ENST00000440240 CC2D2BQ6DHV5 1058 aa27.22■■□□□ 1.95
CPNE1-219ENST00000440240 OLFM4Q6UX06 510 aa27.22■■□□□ 1.95
CPNE1-219ENST00000440240 IBTKQ9P2D0 1353 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-219ENST00000440240 MYBBP1AQ9BQG0 1328 aaKnown RBP27.21■■□□□ 1.95
CPNE1-219ENST00000440240 CHADLQ6NUI6 762 aa27.21■■□□□ 1.95
CPNE1-219ENST00000440240 RPGRQ92834 1020 aaKnown RBP27.21■■□□□ 1.95
CPNE1-219ENST00000440240 UBN2Q6ZU65 1347 aa27.2■■□□□ 1.95
CPNE1-219ENST00000440240 HOXA10P31260 410 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-219ENST00000440240 PARP10Q53GL7 1025 aa27.2■■□□□ 1.94
CPNE1-219ENST00000440240 PPP1R42Q7Z4L9 355 aa27.2■■□□□ 1.94
CPNE1-219ENST00000440240 SYNE4Q8N205 404 aa27.2■■□□□ 1.94
CPNE1-219ENST00000440240 L3MBTL3Q96JM7 780 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-219ENST00000440240 ABCC12Q96J65 1359 aa27.2■■□□□ 1.94
CPNE1-219ENST00000440240 NUP98P52948 1817 aa27.19■■□□□ 1.94
CPNE1-219ENST00000440240 PDIA6Q15084 440 aa27.19■■□□□ 1.94
CPNE1-219ENST00000440240 GRIPAP1Q4V328 841 aa27.19■■□□□ 1.94
CPNE1-219ENST00000440240 PSMD1Q99460 953 aa27.19■■□□□ 1.94
CPNE1-219ENST00000440240 RIC1Q4ADV7 1423 aa27.18■■□□□ 1.94
CPNE1-219ENST00000440240 IARSP41252 1262 aaKnown RBP27.18■■□□□ 1.94
CPNE1-219ENST00000440240 LRP10Q7Z4F1 713 aa27.17■■□□□ 1.94
CPNE1-219ENST00000440240 RBM17Q96I25 401 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms