RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 DZIP3Q86Y13 1208 aaKnown RBP14.73□□□□□ -0.05
SNHG3-202ENST00000437681 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
SNHG3-202ENST00000437681 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
SNHG3-202ENST00000437681 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
SNHG3-202ENST00000437681 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
SNHG3-202ENST00000437681 PTPRCP08575 1304 aa14.72□□□□□ -0.05
SNHG3-202ENST00000437681 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
SNHG3-202ENST00000437681 KCNQ4P56696 695 aa14.72□□□□□ -0.05
SNHG3-202ENST00000437681 PARP10Q53GL7 1025 aa14.72□□□□□ -0.05
SNHG3-202ENST00000437681 DLEC1Q9Y238 1755 aa14.72□□□□□ -0.05
SNHG3-202ENST00000437681 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
SNHG3-202ENST00000437681 AFDNP55196 1824 aaKnown RBP14.71□□□□□ -0.05
SNHG3-202ENST00000437681 CARMIL3Q8ND23 1372 aa14.71□□□□□ -0.05
SNHG3-202ENST00000437681 GIGYF2Q6Y7W6 1299 aaKnown RBP14.7□□□□□ -0.06
SNHG3-202ENST00000437681 PTGER2P43116 358 aa14.7□□□□□ -0.06
SNHG3-202ENST00000437681 C10orf71Q711Q0 1435 aa14.7□□□□□ -0.06
SNHG3-202ENST00000437681 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
SNHG3-202ENST00000437681 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
SNHG3-202ENST00000437681 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
SNHG3-202ENST00000437681 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
SNHG3-202ENST00000437681 NYXQ9GZU5 481 aa14.69□□□□□ -0.06
SNHG3-202ENST00000437681 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
SNHG3-202ENST00000437681 CD2APQ9Y5K6 639 aa14.69□□□□□ -0.06
SNHG3-202ENST00000437681 KIAA1551Q9HCM1 1747 aa14.68□□□□□ -0.06
SNHG3-202ENST00000437681 HSP90B1P14625 803 aaKnown RBP14.68□□□□□ -0.06
SNHG3-202ENST00000437681 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
SNHG3-202ENST00000437681 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
SNHG3-202ENST00000437681 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
SNHG3-202ENST00000437681 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 KIF16BQ96L93 1317 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 PHF14O94880 888 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 KRT24Q2M2I5 525 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 KSR2Q6VAB6 950 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 PARP3Q9Y6F1 533 aa14.67□□□□□ -0.06
SNHG3-202ENST00000437681 PSDA5PKW4 1024 aaPredicted RBP14.66□□□□□ -0.06
SNHG3-202ENST00000437681 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
SNHG3-202ENST00000437681 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
SNHG3-202ENST00000437681 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
SNHG3-202ENST00000437681 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
SNHG3-202ENST00000437681 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
SNHG3-202ENST00000437681 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
SNHG3-202ENST00000437681 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
SNHG3-202ENST00000437681 CDCA7LQ96GN5 454 aa14.65□□□□□ -0.06
SNHG3-202ENST00000437681 ISCA1Q9BUE6 129 aa14.65□□□□□ -0.06
SNHG3-202ENST00000437681 TGFB2P61812 414 aa14.65□□□□□ -0.06
SNHG3-202ENST00000437681 PROSER3Q2NL68 480 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 PPP1R42Q7Z4L9 355 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 METTL22Q9BUU2 404 aaPredicted RBP14.64□□□□□ -0.07
SNHG3-202ENST00000437681 MSH5O43196 834 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 MYL6BP14649 208 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 FLIIQ13045 1269 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 ARXQ96QS3 562 aa14.64□□□□□ -0.07
SNHG3-202ENST00000437681 FKBP8Q14318 412 aa14.63□□□□□ -0.07
SNHG3-202ENST00000437681 NFIXQ14938 502 aa14.63□□□□□ -0.07
SNHG3-202ENST00000437681 SLC10A5Q5PT55 438 aa14.63□□□□□ -0.07
SNHG3-202ENST00000437681 CCDC191Q8NCU4 936 aa14.63□□□□□ -0.07
SNHG3-202ENST00000437681 BRCA1P38398 1863 aaKnown RBP14.63□□□□□ -0.07
SNHG3-202ENST00000437681 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
SNHG3-202ENST00000437681 RARSP54136 660 aaKnown RBP14.63□□□□□ -0.07
SNHG3-202ENST00000437681 TTLL7Q6ZT98 887 aa14.63□□□□□ -0.07
SNHG3-202ENST00000437681 SRP68Q9UHB9 627 aaKnown RBP14.63□□□□□ -0.07
SNHG3-202ENST00000437681 KLRG2A4D1S0 409 aaPredicted RBP14.62□□□□□ -0.07
SNHG3-202ENST00000437681 ALDH1L1O75891 902 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 MS4A1P11836 297 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
SNHG3-202ENST00000437681 TBC1D2BQ9UPU7 963 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 ADCY9O60503 1353 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 ANKRD31Q8N7Z5 1873 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 MMP10P09238 476 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 NEXNQ0ZGT2 675 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 TBC1D9BQ66K14 1250 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 TPTE2Q6XPS3 522 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 CDHR2Q9BYE9 1310 aa14.62□□□□□ -0.07
SNHG3-202ENST00000437681 ARFGEF1Q9Y6D6 1849 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 ZBTB7AO95365 584 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 ST5P78524 1137 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 DDX60Q8IY21 1712 aaKnown RBP14.61□□□□□ -0.07
SNHG3-202ENST00000437681 SERPINB2P05120 415 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 RIC3Q7Z5B4 369 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 BRIP1Q9BX63 1249 aa14.61□□□□□ -0.07
SNHG3-202ENST00000437681 ELL2O00472 640 aaPredicted RBP14.6□□□□□ -0.07
SNHG3-202ENST00000437681 DDR1Q08345 913 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 LINS1Q8NG48 757 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 DNAAF4Q8WXU2 420 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 SSH1Q8WYL5 1049 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 PDE6BP35913 854 aa14.6□□□□□ -0.07
SNHG3-202ENST00000437681 HLFQ16534 295 aa14.59□□□□□ -0.07
SNHG3-202ENST00000437681 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
SNHG3-202ENST00000437681 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
SNHG3-202ENST00000437681 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
SNHG3-202ENST00000437681 NIP7Q9Y221 180 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNHG3-202ENST00000437681 MYH3P11055 1940 aa14.59□□□□□ -0.07
SNHG3-202ENST00000437681 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
SNHG3-202ENST00000437681 UTYO14607 1347 aa14.58□□□□□ -0.08
SNHG3-202ENST00000437681 NTSR2O95665 410 aa14.58□□□□□ -0.08
SNHG3-202ENST00000437681 PCCAP05165 728 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms