RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 BICDL1Q6ZP65 573 aa14.05□□□□□ -0.16
HOXD3-203ENST00000432796 TLL2Q9Y6L7 1015 aa14.05□□□□□ -0.16
HOXD3-203ENST00000432796 AOC2O75106 756 aa14.04□□□□□ -0.16
HOXD3-203ENST00000432796 BRPF1P55201 1214 aaPredicted RBP14.04□□□□□ -0.16
HOXD3-203ENST00000432796 SOX10P56693 466 aa14.04□□□□□ -0.16
HOXD3-203ENST00000432796 STYK1Q6J9G0 422 aa14.04□□□□□ -0.16
HOXD3-203ENST00000432796 PRR5LQ6MZQ0 368 aa14.04□□□□□ -0.16
HOXD3-203ENST00000432796 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
HOXD3-203ENST00000432796 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
HOXD3-203ENST00000432796 COL11A2P13942 1736 aaPredicted RBP14.02□□□□□ -0.16
HOXD3-203ENST00000432796 SRGNP10124 158 aa14.02□□□□□ -0.17
HOXD3-203ENST00000432796 FMR1Q06787 632 aaKnown RBP eCLIP14.02□□□□□ -0.17
HOXD3-203ENST00000432796 CST9Q5W186 159 aa14.02□□□□□ -0.17
HOXD3-203ENST00000432796 GPC2Q8N158 579 aa14.02□□□□□ -0.17
HOXD3-203ENST00000432796 CCDC24Q8N4L8 307 aa14.02□□□□□ -0.17
HOXD3-203ENST00000432796 POLKQ9UBT6 870 aa14.02□□□□□ -0.17
HOXD3-203ENST00000432796 FZD9O00144 591 aa14.01□□□□□ -0.17
HOXD3-203ENST00000432796 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
HOXD3-203ENST00000432796 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
HOXD3-203ENST00000432796 C7orf43Q8WVR3 580 aa14.01□□□□□ -0.17
HOXD3-203ENST00000432796 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
HOXD3-203ENST00000432796 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-203ENST00000432796 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
HOXD3-203ENST00000432796 GCC1Q96CN9 775 aa14□□□□□ -0.17
HOXD3-203ENST00000432796 TRAF5O00463 557 aa13.99□□□□□ -0.17
HOXD3-203ENST00000432796 SAPCD2Q86UD0 394 aa13.99□□□□□ -0.17
HOXD3-203ENST00000432796 CNBD1Q8NA66 436 aa13.99□□□□□ -0.17
HOXD3-203ENST00000432796 HHIPL1Q96JK4 782 aa13.99□□□□□ -0.17
HOXD3-203ENST00000432796 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
HOXD3-203ENST00000432796 A0A087WZG4 1122 aa13.98□□□□□ -0.17
HOXD3-203ENST00000432796 CANXP27824 592 aaKnown RBP13.98□□□□□ -0.17
HOXD3-203ENST00000432796 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
HOXD3-203ENST00000432796 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 NPHP1O15259 732 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 HSPA5P11021 654 aaKnown RBP13.97□□□□□ -0.17
HOXD3-203ENST00000432796 LMOD1P29536 600 aaPredicted RBP13.97□□□□□ -0.17
HOXD3-203ENST00000432796 ST5P78524 1137 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
HOXD3-203ENST00000432796 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
HOXD3-203ENST00000432796 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
HOXD3-203ENST00000432796 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
HOXD3-203ENST00000432796 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
HOXD3-203ENST00000432796 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
HOXD3-203ENST00000432796 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 CELF2O95319 508 aaKnown RBP13.94□□□□□ -0.18
HOXD3-203ENST00000432796 NPR1P16066 1061 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 SCNN1DP51172 638 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 NOGQ13253 232 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 GJA3Q9Y6H8 435 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
HOXD3-203ENST00000432796 STARD3NLO95772 234 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 EPS15P42566 896 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 EIF6P56537 245 aaKnown RBP13.93□□□□□ -0.18
HOXD3-203ENST00000432796 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 MRC1P22897 1456 aa13.93□□□□□ -0.18
HOXD3-203ENST00000432796 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
HOXD3-203ENST00000432796 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
HOXD3-203ENST00000432796 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
HOXD3-203ENST00000432796 SAGE1Q9NXZ1 904 aa13.92□□□□□ -0.18
HOXD3-203ENST00000432796 TBC1D2BQ9UPU7 963 aa13.92□□□□□ -0.18
HOXD3-203ENST00000432796 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
HOXD3-203ENST00000432796 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
HOXD3-203ENST00000432796 AKAP4Q5JQC9 854 aa13.91□□□□□ -0.18
HOXD3-203ENST00000432796 PSMD1Q99460 953 aa13.91□□□□□ -0.18
HOXD3-203ENST00000432796 ZIC5Q96T25 663 aa13.9□□□□□ -0.18
HOXD3-203ENST00000432796 PANK3Q9H999 370 aa13.9□□□□□ -0.18
HOXD3-203ENST00000432796 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
HOXD3-203ENST00000432796 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
HOXD3-203ENST00000432796 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
HOXD3-203ENST00000432796 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
HOXD3-203ENST00000432796 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
HOXD3-203ENST00000432796 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
HOXD3-203ENST00000432796 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
HOXD3-203ENST00000432796 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
HOXD3-203ENST00000432796 GLIS2Q9BZE0 524 aaPredicted RBP13.88□□□□□ -0.19
HOXD3-203ENST00000432796 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
HOXD3-203ENST00000432796 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
HOXD3-203ENST00000432796 BCORQ6W2J9 1755 aa13.88□□□□□ -0.19
HOXD3-203ENST00000432796 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
HOXD3-203ENST00000432796 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
HOXD3-203ENST00000432796 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
HOXD3-203ENST00000432796 ALDH1B1P30837 517 aa13.87□□□□□ -0.19
HOXD3-203ENST00000432796 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
HOXD3-203ENST00000432796 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
HOXD3-203ENST00000432796 COL4A5P29400 1685 aa13.87□□□□□ -0.19
HOXD3-203ENST00000432796 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
HOXD3-203ENST00000432796 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
HOXD3-203ENST00000432796 GPRC5DQ9NZD1 345 aa13.86□□□□□ -0.19
HOXD3-203ENST00000432796 HUNKP57058 714 aa13.85□□□□□ -0.19
HOXD3-203ENST00000432796 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
HOXD3-203ENST00000432796 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
HOXD3-203ENST00000432796 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
HOXD3-203ENST00000432796 TRPA1O75762 1119 aa13.84□□□□□ -0.19
HOXD3-203ENST00000432796 CC2D2BQ6DHV5 1058 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms