RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
FN1-209ENST00000432072 CCDC12Q8WUD4 166 aaPredicted RBP11.62□□□□□ -0.55
FN1-209ENST00000432072 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 ANAPC15P60006 121 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
FN1-209ENST00000432072 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 IFIT3O14879 490 aaKnown RBP11.61□□□□□ -0.55
FN1-209ENST00000432072 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
FN1-209ENST00000432072 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 PDRG1Q9NUG6 133 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 SERPINC1P01008 464 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 NLRP5P59047 1200 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 PPFIBP1Q86W92 1011 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 TRAF1Q13077 416 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
FN1-209ENST00000432072 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 SKIDA1Q1XH10 827 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 CFAP45Q9UL16 551 aa11.61□□□□□ -0.55
FN1-209ENST00000432072 CCDC82Q8N4S0 544 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
FN1-209ENST00000432072 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 TSG101Q99816 390 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 CCDC39Q9UFE4 941 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 ANKRD62A6NC57 917 aa11.6□□□□□ -0.55
FN1-209ENST00000432072 C11orf95C9JLR9 678 aaPredicted RBP11.6□□□□□ -0.55
FN1-209ENST00000432072 CCDC8Q9H0W5 538 aaPredicted RBP11.6□□□□□ -0.55
FN1-209ENST00000432072 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
FN1-209ENST00000432072 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 FIBPO43427 364 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 CETN2P41208 172 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 CHD1O14646 1710 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
FN1-209ENST00000432072 RXRBP28702 533 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 RABEP1Q15276 862 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 BICD1Q96G01 975 aa11.59□□□□□ -0.55
FN1-209ENST00000432072 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
FN1-209ENST00000432072 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 TRIM5Q9C035 493 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 PLCH2O75038 1416 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 CCDC194A0A1B0GVG4 234 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 NOD1Q9Y239 953 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 UQCRFS1P1P0C7P4 283 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 GBP2P32456 591 aaPredicted RBP11.58□□□□□ -0.56
FN1-209ENST00000432072 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 ZNF397Q8NF99 534 aaPredicted RBP11.58□□□□□ -0.56
FN1-209ENST00000432072 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
FN1-209ENST00000432072 PTPRCP08575 1304 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 ABCC1P33527 1531 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 TAF12Q16514 161 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 GOLIM4O00461 696 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 F6X3S4 739 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 FGFR1OPO95684 399 aaKnown RBP11.57□□□□□ -0.56
FN1-209ENST00000432072 H7C1D1 291 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 KRT85P78386 507 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
FN1-209ENST00000432072 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
FN1-209ENST00000432072 TRPM2O94759 1503 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 STXBP4Q6ZWJ1 553 aa11.57□□□□□ -0.56
FN1-209ENST00000432072 JARID2Q92833 1246 aaPredicted RBP11.57□□□□□ -0.56
FN1-209ENST00000432072 QTRT2Q9H974 415 aaKnown RBP11.57□□□□□ -0.56
FN1-209ENST00000432072 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
FN1-209ENST00000432072 SLC39A6Q13433 755 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 NFKBIBQ15653 356 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 PLCG2P16885 1265 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 SLAIN2Q9P270 581 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
FN1-209ENST00000432072 CYP7A1P22680 504 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
FN1-209ENST00000432072 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 HOOK2Q96ED9 719 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
FN1-209ENST00000432072 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 C14orf93Q9H972 538 aaKnown RBP11.56□□□□□ -0.56
FN1-209ENST00000432072 PIK3R4Q99570 1358 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 TMEM67Q5HYA8 995 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 ATP10BO94823 1461 aa11.56□□□□□ -0.56
FN1-209ENST00000432072 CALML4Q96GE6 196 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 CETN1Q12798 172 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
FN1-209ENST00000432072 WDR62O43379 1518 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 NIM1KQ8IY84 436 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 TMEM57Q8N5G2 664 aa11.55□□□□□ -0.56
FN1-209ENST00000432072 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms