RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
ATG4B-212ENST00000430617 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
ATG4B-212ENST00000430617 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
ATG4B-212ENST00000430617 MTHFSP49914 203 aa13.78□□□□□ -0.2
ATG4B-212ENST00000430617 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
ATG4B-212ENST00000430617 PDE6BP35913 854 aa13.77□□□□□ -0.21
ATG4B-212ENST00000430617 ECE1P42892 770 aa13.77□□□□□ -0.21
ATG4B-212ENST00000430617 SOX10P56693 466 aa13.77□□□□□ -0.21
ATG4B-212ENST00000430617 CST9Q5W186 159 aa13.77□□□□□ -0.21
ATG4B-212ENST00000430617 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
ATG4B-212ENST00000430617 POLKQ9UBT6 870 aa13.77□□□□□ -0.21
ATG4B-212ENST00000430617 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-212ENST00000430617 PRPF38BQ5VTL8 546 aaKnown RBP13.76□□□□□ -0.21
ATG4B-212ENST00000430617 TBC1D9BQ66K14 1250 aa13.76□□□□□ -0.21
ATG4B-212ENST00000430617 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
ATG4B-212ENST00000430617 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-212ENST00000430617 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
ATG4B-212ENST00000430617 COL4A5P29400 1685 aa13.75□□□□□ -0.21
ATG4B-212ENST00000430617 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
ATG4B-212ENST00000430617 TRAF5O00463 557 aa13.74□□□□□ -0.21
ATG4B-212ENST00000430617 MAP2K2P36507 400 aa13.74□□□□□ -0.21
ATG4B-212ENST00000430617 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
ATG4B-212ENST00000430617 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
ATG4B-212ENST00000430617 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-212ENST00000430617 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
ATG4B-212ENST00000430617 SRGNP10124 158 aa13.73□□□□□ -0.21
ATG4B-212ENST00000430617 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
ATG4B-212ENST00000430617 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
ATG4B-212ENST00000430617 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
ATG4B-212ENST00000430617 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
ATG4B-212ENST00000430617 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
ATG4B-212ENST00000430617 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
ATG4B-212ENST00000430617 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
ATG4B-212ENST00000430617 FZD9O00144 591 aa13.71□□□□□ -0.21
ATG4B-212ENST00000430617 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
ATG4B-212ENST00000430617 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
ATG4B-212ENST00000430617 MRC1P22897 1456 aa13.71□□□□□ -0.21
ATG4B-212ENST00000430617 CA12O43570 354 aa13.7□□□□□ -0.22
ATG4B-212ENST00000430617 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
ATG4B-212ENST00000430617 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATG4B-212ENST00000430617 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
ATG4B-212ENST00000430617 GPC2Q8N158 579 aa13.7□□□□□ -0.22
ATG4B-212ENST00000430617 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
ATG4B-212ENST00000430617 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-212ENST00000430617 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-212ENST00000430617 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-212ENST00000430617 CIAPIN1Q6FI81 312 aa13.69□□□□□ -0.22
ATG4B-212ENST00000430617 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
ATG4B-212ENST00000430617 ZIC5Q96T25 663 aa13.69□□□□□ -0.22
ATG4B-212ENST00000430617 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
ATG4B-212ENST00000430617 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
ATG4B-212ENST00000430617 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
ATG4B-212ENST00000430617 EPS15P42566 896 aa13.68□□□□□ -0.22
ATG4B-212ENST00000430617 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
ATG4B-212ENST00000430617 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
ATG4B-212ENST00000430617 SNED1Q8TER0 1413 aa13.67□□□□□ -0.22
ATG4B-212ENST00000430617 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
ATG4B-212ENST00000430617 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
ATG4B-212ENST00000430617 SCNN1DP51172 638 aa13.67□□□□□ -0.22
ATG4B-212ENST00000430617 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
ATG4B-212ENST00000430617 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
ATG4B-212ENST00000430617 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
ATG4B-212ENST00000430617 A0A087WZG4 1122 aa13.64□□□□□ -0.23
ATG4B-212ENST00000430617 ST5P78524 1137 aa13.64□□□□□ -0.23
ATG4B-212ENST00000430617 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
ATG4B-212ENST00000430617 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
ATG4B-212ENST00000430617 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-212ENST00000430617 NPHP1O15259 732 aa13.63□□□□□ -0.23
ATG4B-212ENST00000430617 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
ATG4B-212ENST00000430617 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-212ENST00000430617 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
ATG4B-212ENST00000430617 HHIPL1Q96JK4 782 aa13.63□□□□□ -0.23
ATG4B-212ENST00000430617 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
ATG4B-212ENST00000430617 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
ATG4B-212ENST00000430617 NPR1P16066 1061 aa13.62□□□□□ -0.23
ATG4B-212ENST00000430617 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
ATG4B-212ENST00000430617 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
ATG4B-212ENST00000430617 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
ATG4B-212ENST00000430617 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-212ENST00000430617 SZT2Q5T011 3432 aa13.61□□□□□ -0.23
ATG4B-212ENST00000430617 KLRG2A4D1S0 409 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-212ENST00000430617 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
ATG4B-212ENST00000430617 GLIS2Q9BZE0 524 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-212ENST00000430617 NUP98P52948 1817 aa13.6□□□□□ -0.23
ATG4B-212ENST00000430617 STARD3NLO95772 234 aa13.6□□□□□ -0.23
ATG4B-212ENST00000430617 EIF6P56537 245 aaKnown RBP13.6□□□□□ -0.23
ATG4B-212ENST00000430617 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
ATG4B-212ENST00000430617 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
ATG4B-212ENST00000430617 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
ATG4B-212ENST00000430617 CENPFP49454 3210 aa13.6□□□□□ -0.23
ATG4B-212ENST00000430617 ZNF408Q9H9D4 720 aa13.59□□□□□ -0.23
ATG4B-212ENST00000430617 A1BGP04217 495 aa13.58□□□□□ -0.24
ATG4B-212ENST00000430617 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-212ENST00000430617 NOGQ13253 232 aa13.58□□□□□ -0.24
ATG4B-212ENST00000430617 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-212ENST00000430617 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-212ENST00000430617 PSMD1Q99460 953 aa13.58□□□□□ -0.24
ATG4B-212ENST00000430617 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-212ENST00000430617 DLK2Q6UY11 383 aa13.57□□□□□ -0.24
ATG4B-212ENST00000430617 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms