RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FAM157BP0CG42 384 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 CD33P20138 364 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 SAMD5Q5TGI4 173 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 PHACTR1Q9C0D0 580 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 LRRC4BQ9NT99 713 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 GDF2Q9UK05 429 aaPredicted RBP10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 HCN2Q9UL51 889 aa10.15□□□□□ -0.78
HMGB3P5-201ENST00000428894 HIRAP54198 1017 aaPredicted RBP10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 POTEAQ6S8J7 498 aa10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 GOLGA6L1Q8N7Z2 621 aa10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 GALNT6Q8NCL4 622 aa10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 SCARF2Q96GP6 870 aaPredicted RBP10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
HMGB3P5-201ENST00000428894 GSK3AP49840 483 aa10.13□□□□□ -0.79
HMGB3P5-201ENST00000428894 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
HMGB3P5-201ENST00000428894 IRS1P35568 1242 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 RASSF7Q02833 373 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 STAG2Q8N3U4 1231 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 EDARADDQ8WWZ3 215 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 ARXQ96QS3 562 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 C2orf49Q9BVC5 232 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 GGA1Q9UJY5 639 aa10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 DNMT3AQ9Y6K1 912 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P5-201ENST00000428894 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
HMGB3P5-201ENST00000428894 EFSO43281 561 aa10.11□□□□□ -0.79
HMGB3P5-201ENST00000428894 STRN4Q9NRL3 753 aa10.11□□□□□ -0.79
HMGB3P5-201ENST00000428894 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
HMGB3P5-201ENST00000428894 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 ARAFP10398 606 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 LAMC2Q13753 1193 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 ALDH16A1Q8IZ83 802 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 TMEM151AQ8N4L1 468 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 NGLY1Q96IV0 654 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 ANKIB1Q9P2G1 1089 aa10.1□□□□□ -0.79
HMGB3P5-201ENST00000428894 NEURL1BA8MQ27 555 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 GDF11O95390 407 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 IGFBP4P22692 258 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 SLCO4C1Q6ZQN7 724 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 BEND7Q8N7W2 519 aaPredicted RBP10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 HSH2DQ96JZ2 352 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
HMGB3P5-201ENST00000428894 PODNQ7Z5L7 613 aa10.08□□□□□ -0.8
HMGB3P5-201ENST00000428894 ZNF280CQ8ND82 737 aa10.08□□□□□ -0.8
HMGB3P5-201ENST00000428894 SUSD3Q96L08 255 aa10.08□□□□□ -0.8
HMGB3P5-201ENST00000428894 SFSWAPQ12872 951 aaKnown RBP10.07□□□□□ -0.8
HMGB3P5-201ENST00000428894 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
HMGB3P5-201ENST00000428894 KLF15Q9UIH9 416 aa10.07□□□□□ -0.8
HMGB3P5-201ENST00000428894 NOVA2Q9UNW9 492 aaKnown RBP10.07□□□□□ -0.8
HMGB3P5-201ENST00000428894 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
HMGB3P5-201ENST00000428894 ADH6P28332 368 aa10.06□□□□□ -0.8
HMGB3P5-201ENST00000428894 KANK3Q6NY19 840 aa10.06□□□□□ -0.8
HMGB3P5-201ENST00000428894 RRAGCQ9HB90 399 aa10.06□□□□□ -0.8
HMGB3P5-201ENST00000428894 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
HMGB3P5-201ENST00000428894 EPXP11678 715 aa10.05□□□□□ -0.8
HMGB3P5-201ENST00000428894 AMPD1P23109 780 aa10.05□□□□□ -0.8
HMGB3P5-201ENST00000428894 PCBP4P57723 403 aaKnown RBP10.05□□□□□ -0.8
HMGB3P5-201ENST00000428894 NISCHQ9Y2I1 1504 aa10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 WEE1P30291 646 aa10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 SNRPNP63162 240 aaKnown RBP10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 ZNF468Q5VIY5 522 aaPredicted RBP10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 BRD7Q9NPI1 651 aa10.04□□□□□ -0.8
HMGB3P5-201ENST00000428894 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 SRPK2P78362 688 aaKnown RBP10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 HIF1AQ16665 826 aa10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 RTN1Q16799 776 aa10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 KCTD17Q8N5Z5 321 aa10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P5-201ENST00000428894 TYRO3Q06418 890 aa10.02□□□□□ -0.81
HMGB3P5-201ENST00000428894 VTI1AQ96AJ9 217 aa10.02□□□□□ -0.81
HMGB3P5-201ENST00000428894 SLC30A3Q99726 388 aa10.02□□□□□ -0.81
HMGB3P5-201ENST00000428894 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
HMGB3P5-201ENST00000428894 FOXO3O43524 673 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 BTLAQ7Z6A9 289 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 SYT9Q86SS6 491 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 MKL2Q9ULH7 1088 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 ZMIZ1Q9ULJ6 1067 aa10.01□□□□□ -0.81
HMGB3P5-201ENST00000428894 KCNQ4P56696 695 aa9.99□□□□□ -0.81
HMGB3P5-201ENST00000428894 SPEM2Q0P670 501 aa9.99□□□□□ -0.81
HMGB3P5-201ENST00000428894 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
HMGB3P5-201ENST00000428894 ACIN1Q9UKV3 1341 aaKnown RBP9.99□□□□□ -0.81
HMGB3P5-201ENST00000428894 ATG7O95352 703 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 SWI5Q1ZZU3 235 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 CHSY3Q70JA7 882 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 STK32AQ8WU08 396 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
HMGB3P5-201ENST00000428894 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 SIN3BO75182 1162 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms