RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
CRIM1-204ENST00000428774 PI4KAP2A4QPH2 592 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 STARD3NLO95772 234 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 COPS6Q7L5N1 327 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 PI4KAP1Q8N8J0 262 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 DNAAF4Q8WXU2 420 aa13.74□□□□□ -0.21
CRIM1-204ENST00000428774 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
CRIM1-204ENST00000428774 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
CRIM1-204ENST00000428774 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 ANO8Q9HCE9 1232 aaPredicted RBP13.73□□□□□ -0.21
CRIM1-204ENST00000428774 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 MAP3K2Q9Y2U5 619 aa13.73□□□□□ -0.21
CRIM1-204ENST00000428774 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
CRIM1-204ENST00000428774 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
CRIM1-204ENST00000428774 ZNF827Q17R98 1081 aa13.72□□□□□ -0.21
CRIM1-204ENST00000428774 BEND3Q5T5X7 828 aa13.72□□□□□ -0.21
CRIM1-204ENST00000428774 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
CRIM1-204ENST00000428774 QSER1Q2KHR3 1735 aa13.71□□□□□ -0.21
CRIM1-204ENST00000428774 ZBTB7BO15156 539 aaPredicted RBP13.71□□□□□ -0.21
CRIM1-204ENST00000428774 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.21
CRIM1-204ENST00000428774 MEIS3Q99687 375 aa13.71□□□□□ -0.21
CRIM1-204ENST00000428774 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.21
CRIM1-204ENST00000428774 CASZ1Q86V15 1759 aa13.71□□□□□ -0.22
CRIM1-204ENST00000428774 COL15A1P39059 1388 aa13.71□□□□□ -0.22
CRIM1-204ENST00000428774 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
CRIM1-204ENST00000428774 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
CRIM1-204ENST00000428774 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
CRIM1-204ENST00000428774 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
CRIM1-204ENST00000428774 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
CRIM1-204ENST00000428774 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
CRIM1-204ENST00000428774 LAMB2P55268 1798 aa13.7□□□□□ -0.22
CRIM1-204ENST00000428774 AAMPQ13685 434 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
CRIM1-204ENST00000428774 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
CRIM1-204ENST00000428774 SRCIN1Q9C0H9 1055 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 PCDHB15Q9Y5E8 787 aa13.69□□□□□ -0.22
CRIM1-204ENST00000428774 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
CRIM1-204ENST00000428774 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
CRIM1-204ENST00000428774 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
CRIM1-204ENST00000428774 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
CRIM1-204ENST00000428774 SLC27A3Q5K4L6 730 aa13.68□□□□□ -0.22
CRIM1-204ENST00000428774 MYD88Q99836 296 aa13.68□□□□□ -0.22
CRIM1-204ENST00000428774 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
CRIM1-204ENST00000428774 KDM2BQ8NHM5 1336 aa13.67□□□□□ -0.22
CRIM1-204ENST00000428774 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
CRIM1-204ENST00000428774 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
CRIM1-204ENST00000428774 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CRIM1-204ENST00000428774 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
CRIM1-204ENST00000428774 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
CRIM1-204ENST00000428774 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
CRIM1-204ENST00000428774 CHMP4BQ9H444 224 aaKnown RBP13.66□□□□□ -0.22
CRIM1-204ENST00000428774 DDX60Q8IY21 1712 aaKnown RBP13.66□□□□□ -0.22
CRIM1-204ENST00000428774 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
CRIM1-204ENST00000428774 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
CRIM1-204ENST00000428774 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.22
CRIM1-204ENST00000428774 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
CRIM1-204ENST00000428774 MYH3P11055 1940 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 GNPATO15228 680 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 HLFQ16534 295 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 UTYO14607 1347 aa13.64□□□□□ -0.23
CRIM1-204ENST00000428774 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 PHF14O94880 888 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 IGHDP01880 384 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 GNAI3P08754 354 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
CRIM1-204ENST00000428774 UBTFL1P0CB47 393 aaPredicted RBP13.63□□□□□ -0.23
CRIM1-204ENST00000428774 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
CRIM1-204ENST00000428774 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
CRIM1-204ENST00000428774 AK7Q96M32 723 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
CRIM1-204ENST00000428774 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 GRM8O00222 908 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 GCKRQ14397 625 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 SIRT2Q8IXJ6 389 aa13.62□□□□□ -0.23
CRIM1-204ENST00000428774 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
CRIM1-204ENST00000428774 GNAI2P04899 355 aa13.61□□□□□ -0.23
CRIM1-204ENST00000428774 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
CRIM1-204ENST00000428774 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
CRIM1-204ENST00000428774 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
CRIM1-204ENST00000428774 ARXQ96QS3 562 aa13.61□□□□□ -0.23
CRIM1-204ENST00000428774 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
CRIM1-204ENST00000428774 A0A087WZG4 1122 aa13.6□□□□□ -0.23
CRIM1-204ENST00000428774 CASP7P55210 303 aa13.6□□□□□ -0.23
CRIM1-204ENST00000428774 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms