RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 KIF24Q5T7B8 1368 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 SLIT3O75094 1523 aa11.02□□□□□ -0.65
ABCA8-202ENST00000428549 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.65
ABCA8-202ENST00000428549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.65
ABCA8-202ENST00000428549 ZNF772Q68DY9 489 aaPredicted RBP11.01□□□□□ -0.65
ABCA8-202ENST00000428549 SNRNP27Q8WVK2 155 aaKnown RBP11.01□□□□□ -0.65
ABCA8-202ENST00000428549 KCNB2Q92953 911 aa11.01□□□□□ -0.65
ABCA8-202ENST00000428549 RGS17Q9UGC6 210 aaPredicted RBP11.01□□□□□ -0.65
ABCA8-202ENST00000428549 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
ABCA8-202ENST00000428549 TPX2Q9ULW0 747 aaKnown RBP11.01□□□□□ -0.65
ABCA8-202ENST00000428549 NFAT5O94916 1531 aa11□□□□□ -0.65
ABCA8-202ENST00000428549 USP19O94966 1318 aa11□□□□□ -0.65
ABCA8-202ENST00000428549 AFF2P51816 1311 aa11□□□□□ -0.65
ABCA8-202ENST00000428549 SCYL1Q96KG9 808 aa11□□□□□ -0.65
ABCA8-202ENST00000428549 RYDENQ9NUL5 291 aaKnown RBP11□□□□□ -0.65
ABCA8-202ENST00000428549 NUDCQ9Y266 331 aa11□□□□□ -0.65
ABCA8-202ENST00000428549 PHRF1Q9P1Y6 1649 aaKnown RBP11□□□□□ -0.65
ABCA8-202ENST00000428549 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 CFAP69A5D8W1 941 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 PUS10Q3MIT2 529 aaKnown RBP10.99□□□□□ -0.65
ABCA8-202ENST00000428549 EGFLAMQ63HQ2 1017 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 ADAMTS8Q9UP79 889 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 EMILIN1Q9Y6C2 1016 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 FLT4P35916 1363 aa10.99□□□□□ -0.65
ABCA8-202ENST00000428549 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
ABCA8-202ENST00000428549 GCP02774 474 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
ABCA8-202ENST00000428549 TMX4Q9H1E5 349 aaPredicted RBP10.98□□□□□ -0.65
ABCA8-202ENST00000428549 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 TLDC2A0PJX2 215 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 MTA1Q13330 715 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
ABCA8-202ENST00000428549 CCAR1Q8IX12 1150 aaKnown RBP10.98□□□□□ -0.65
ABCA8-202ENST00000428549 PRDM11Q9NQV5 511 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 NRBP1Q9UHY1 535 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 USP21Q9UK80 565 aa10.98□□□□□ -0.65
ABCA8-202ENST00000428549 MAP3K19Q56UN5 1328 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 TBC1D12O60347 775 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 FBLN1P23142 703 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 ANKRD23Q86SG2 305 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
ABCA8-202ENST00000428549 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
ABCA8-202ENST00000428549 CRYBG1Q9Y4K1 1723 aa10.97□□□□□ -0.65
ABCA8-202ENST00000428549 IRF6O14896 467 aa10.96□□□□□ -0.65
ABCA8-202ENST00000428549 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.65
ABCA8-202ENST00000428549 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
ABCA8-202ENST00000428549 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
ABCA8-202ENST00000428549 BSDC1Q9NW68 430 aaPredicted RBP10.96□□□□□ -0.65
ABCA8-202ENST00000428549 LTN1O94822 1766 aa10.96□□□□□ -0.66
ABCA8-202ENST00000428549 ABCC6O95255 1503 aa10.96□□□□□ -0.66
ABCA8-202ENST00000428549 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 TRPC5Q9UL62 973 aaPredicted RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 CPDO75976 1380 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 IL13P35225 146 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 AMPHP49418 695 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 ICE2Q659A1 982 aa10.95□□□□□ -0.66
ABCA8-202ENST00000428549 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 ZCRB1Q8TBF4 217 aaKnown RBP10.95□□□□□ -0.66
ABCA8-202ENST00000428549 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 RXRBP28702 533 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 POU5F1Q01860 360 aaKnown RBP10.94□□□□□ -0.66
ABCA8-202ENST00000428549 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 DNAJC14Q6Y2X3 702 aaPredicted RBP10.94□□□□□ -0.66
ABCA8-202ENST00000428549 RUNDC1Q96C34 613 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 SLIT2O94813 1529 aa10.94□□□□□ -0.66
ABCA8-202ENST00000428549 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 STK25O00506 426 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
ABCA8-202ENST00000428549 HOXC9P31274 260 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 PBXIP1Q96AQ6 731 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 LNPKQ9C0E8 428 aa10.93□□□□□ -0.66
ABCA8-202ENST00000428549 CCDC189A1A4V9 331 aa10.92□□□□□ -0.66
ABCA8-202ENST00000428549 FCHSD2O94868 740 aa10.92□□□□□ -0.66
ABCA8-202ENST00000428549 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
ABCA8-202ENST00000428549 RBM6P78332 1123 aaKnown RBP10.92□□□□□ -0.66
ABCA8-202ENST00000428549 BIRC2Q13490 618 aa10.92□□□□□ -0.66
ABCA8-202ENST00000428549 EIF4A2Q14240 407 aaKnown RBP10.92□□□□□ -0.66
ABCA8-202ENST00000428549 SDE2Q6IQ49 451 aa10.92□□□□□ -0.66
ABCA8-202ENST00000428549 IP6K1Q92551 441 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms