RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HAP1P54257 671 aaPredicted RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 PTPN5P54829 565 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 MAP2K1Q02750 393 aaPredicted RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 SF3B2Q13435 895 aaKnown RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 ZKSCAN8Q15776 578 aaPredicted RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF9Q3BBW0 867 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 LRCH2Q5VUJ6 765 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 THSD4Q6ZMP0 1018 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 MMS22LQ6ZRQ5 1243 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 EGFL6Q8IUX8 553 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 P3H3Q8IVL6 736 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 DRC7Q8IY82 874 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 MSL3Q8N5Y2 521 aaKnown RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 FAM200AQ8TCP9 573 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 STAG1Q8WVM7 1258 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF3Q9H094 633 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 CXorf56Q9H5V9 222 aa6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 TTC12Q9H892 705 aaPredicted RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.62□□□□□ -1.35
VTI1BP4-201ENST00000427516 BICRAQ9NZM4 1560 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 WDR62O43379 1518 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 PLA2R1Q13018 1463 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 KIF24Q5T7B8 1368 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 PLEKHG2Q9H7P9 1386 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 ONECUT3O60422 494 aaPredicted RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 RPS6KA5O75582 802 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 CPP00450 1065 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 EIF5P55010 431 aaKnown RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 IRX1P78414 480 aaPredicted RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 SARNPP82979 210 aaKnown RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 ALDH1L2Q3SY69 923 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 ATF7IPQ6VMQ6 1270 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 TBC1D9Q6ZT07 1266 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF11Q86T75 865 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 ITPRIPQ8IWB1 547 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 TBC1D22AQ8WUA7 517 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 WNT2BQ93097 391 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 FAM210AQ96ND0 272 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 PAIP2Q9BPZ3 127 aaKnown RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 KIAA1468Q9P260 1216 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 RRP15Q9Y3B9 282 aaKnown RBP6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 ADCY10Q96PN6 1610 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 IQGAP2Q13576 1575 aa6.61□□□□□ -1.35
VTI1BP4-201ENST00000427516 MAGI3Q5TCQ9 1506 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 SYNJ2O15056 1496 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 IQSEC2Q5JU85 1478 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 WDR7Q9Y4E6 1490 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 NUP155O75694 1391 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 LOC102724159A0A0B4J2E5 919 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 TTC36A6NLP5 189 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 GOLGA8CPA6NN73 597 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 A6NNZ2 444 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 SGSM2O43147 1006 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 IGSF3O75054 1194 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 H2AFXP16104 143 aaPredicted RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 ACTN2P35609 894 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 GSCP56915 257 aaPredicted RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 EN1Q05925 392 aaPredicted RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 PWP2Q15269 919 aaKnown RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 TSR1Q2NL82 804 aaKnown RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 TUBB8Q3ZCM7 444 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 KMT5BQ4FZB7 885 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 C10orf67Q8IYJ2 551 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 DNAAF4Q8WXU2 420 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 UBXN4Q92575 508 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 ERCC4Q92889 916 aaPredicted RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 C16orf45Q96MC5 204 aaPredicted RBP6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 KIF2CQ99661 725 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 TTC37Q6PGP7 1564 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 MED14O60244 1454 aa6.6□□□□□ -1.35
VTI1BP4-201ENST00000427516 NSD2O96028 1365 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 DISP3Q9P2K9 1392 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 PBRM1Q86U86 1689 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 GOLGA6L9A6NEM1 432 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 ERLIN1O75477 346 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 RDXP35241 583 aaKnown RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 RBM6P78332 1123 aaKnown RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 PLCB2Q00722 1185 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 HSP90B2PQ58FF3 399 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 CCDC158Q5M9N0 1113 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 SYT10Q6XYQ8 523 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF5PQ86XG9 351 aaPredicted RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 CCDC150Q8NCX0 1101 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 ARHGAP45Q92619 1136 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 RBM27Q9P2N5 1060 aaKnown RBP6.59□□□□□ -1.35
VTI1BP4-201ENST00000427516 C9orf84Q5VXU9 1444 aa6.59□□□□□ -1.36
VTI1BP4-201ENST00000427516 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 USP32Q8NFA0 1604 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 LAMC3Q9Y6N6 1575 aa6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 A0A087WUV0 522 aaPredicted RBP6.58□□□□□ -1.36
VTI1BP4-201ENST00000427516 EFCAB8A8MWE9 144 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms