RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 COL23A1Q86Y22 540 aaPredicted RBP22.6■■□□□ 1.21
AC055811.2-201ENST00000427497 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
AC055811.2-201ENST00000427497 POLD1P28340 1107 aa22.59■■□□□ 1.21
AC055811.2-201ENST00000427497 PDIA6Q15084 440 aa22.59■■□□□ 1.21
AC055811.2-201ENST00000427497 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
AC055811.2-201ENST00000427497 HYPKQ9NX55 129 aa22.59■■□□□ 1.21
AC055811.2-201ENST00000427497 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
AC055811.2-201ENST00000427497 MSH5O43196 834 aa22.58■■□□□ 1.21
AC055811.2-201ENST00000427497 ANXA1P04083 346 aa22.58■■□□□ 1.21
AC055811.2-201ENST00000427497 PROSER3Q2NL68 480 aa22.58■■□□□ 1.21
AC055811.2-201ENST00000427497 LOC102724428A0A0B4J2F2 783 aa22.58■■□□□ 1.2
AC055811.2-201ENST00000427497 SIK1P57059 783 aa22.58■■□□□ 1.2
AC055811.2-201ENST00000427497 SKAP1Q86WV1 359 aa22.58■■□□□ 1.2
AC055811.2-201ENST00000427497 UBR3Q6ZT12 1888 aa22.57■■□□□ 1.2
AC055811.2-201ENST00000427497 MEIS3Q99687 375 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 ATG3Q9NT62 314 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 ADCY9O60503 1353 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 UTRNP46939 3433 aa22.56■■□□□ 1.2
AC055811.2-201ENST00000427497 SMC5Q8IY18 1101 aa22.55■■□□□ 1.2
AC055811.2-201ENST00000427497 FLAD1Q8NFF5 587 aa22.55■■□□□ 1.2
AC055811.2-201ENST00000427497 ATP10DQ9P241 1426 aa22.55■■□□□ 1.2
AC055811.2-201ENST00000427497 AK7Q96M32 723 aa22.55■■□□□ 1.2
AC055811.2-201ENST00000427497 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
AC055811.2-201ENST00000427497 DNAAF4Q8WXU2 420 aa22.54■■□□□ 1.2
AC055811.2-201ENST00000427497 PI4KAP2A4QPH2 592 aa22.53■■□□□ 1.2
AC055811.2-201ENST00000427497 LRP10Q7Z4F1 713 aa22.53■■□□□ 1.2
AC055811.2-201ENST00000427497 PI4KAP1Q8N8J0 262 aa22.53■■□□□ 1.2
AC055811.2-201ENST00000427497 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
AC055811.2-201ENST00000427497 ITPK1Q13572 414 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 AMIGO3Q86WK7 504 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 ATP6V1AP38606 617 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
AC055811.2-201ENST00000427497 YY1P25490 414 aa22.51■■□□□ 1.19
AC055811.2-201ENST00000427497 BEND3Q5T5X7 828 aa22.51■■□□□ 1.19
AC055811.2-201ENST00000427497 MSL1Q68DK7 614 aa22.51■■□□□ 1.19
AC055811.2-201ENST00000427497 PDZRN3Q9UPQ7 1066 aa22.51■■□□□ 1.19
AC055811.2-201ENST00000427497 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
AC055811.2-201ENST00000427497 KLHL34Q8N239 644 aa22.5■■□□□ 1.19
AC055811.2-201ENST00000427497 ANKRD44Q8N8A2 993 aa22.5■■□□□ 1.19
AC055811.2-201ENST00000427497 SRCIN1Q9C0H9 1055 aa22.5■■□□□ 1.19
AC055811.2-201ENST00000427497 GNAI3P08754 354 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 PHF14O94880 888 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 DDX58O95786 925 aaKnown RBP22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 SSFA2P28290 1259 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 CEP85Q6P2H3 762 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 SMIM5Q71RC9 77 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 VSIG10Q8N0Z9 540 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 USP44Q9H0E7 712 aa22.49■■□□□ 1.19
AC055811.2-201ENST00000427497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
AC055811.2-201ENST00000427497 MAP3K2Q9Y2U5 619 aa22.48■■□□□ 1.19
AC055811.2-201ENST00000427497 COL5A3P25940 1745 aaPredicted RBP22.47■■□□□ 1.19
AC055811.2-201ENST00000427497 MYL6BP14649 208 aa22.47■■□□□ 1.19
AC055811.2-201ENST00000427497 GCC1Q96CN9 775 aa22.47■■□□□ 1.19
AC055811.2-201ENST00000427497 SLC4A9Q96Q91 983 aa22.47■■□□□ 1.19
AC055811.2-201ENST00000427497 GNAI2P04899 355 aa22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 RGS3P49796 1198 aa22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 XAGE3Q8WTP9 111 aa22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 RBM42Q9BTD8 480 aaKnown RBP22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 GNPATO15228 680 aa22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 COPS6Q7L5N1 327 aa22.46■■□□□ 1.19
AC055811.2-201ENST00000427497 IBTKQ9P2D0 1353 aaPredicted RBP22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 NBPF26B4DH59 902 aa22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 ALDH1L1O75891 902 aa22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 NBPF10Q6P3W6 841 aaKnown RBP22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 NBPF15Q8N660 670 aa22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 CHD4Q14839 1912 aa22.45■■□□□ 1.18
AC055811.2-201ENST00000427497 NUCB1Q02818 461 aa22.44■■□□□ 1.18
AC055811.2-201ENST00000427497 AIMP1Q12904 312 aaKnown RBP22.44■■□□□ 1.18
AC055811.2-201ENST00000427497 NLGN2Q8NFZ4 835 aa22.44■■□□□ 1.18
AC055811.2-201ENST00000427497 TEX13AQ9BXU3 409 aaPredicted RBP22.44■■□□□ 1.18
AC055811.2-201ENST00000427497 PIP4K2AP48426 406 aaPredicted RBP22.42■■□□□ 1.18
AC055811.2-201ENST00000427497 LINS1Q8NG48 757 aa22.42■■□□□ 1.18
AC055811.2-201ENST00000427497 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
AC055811.2-201ENST00000427497 ARFGEF2Q9Y6D5 1785 aa22.42■■□□□ 1.18
AC055811.2-201ENST00000427497 UBTFL1P0CB47 393 aaPredicted RBP22.42■■□□□ 1.18
AC055811.2-201ENST00000427497 A1BGP04217 495 aa22.41■■□□□ 1.18
AC055811.2-201ENST00000427497 GPR162Q16538 588 aa22.41■■□□□ 1.18
AC055811.2-201ENST00000427497 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
AC055811.2-201ENST00000427497 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
AC055811.2-201ENST00000427497 MYH14Q7Z406 1995 aaKnown RBP22.41■■□□□ 1.18
AC055811.2-201ENST00000427497 TJP1Q07157 1748 aa22.4■■□□□ 1.18
AC055811.2-201ENST00000427497 RC3H1Q5TC82 1133 aaKnown RBP22.4■■□□□ 1.18
AC055811.2-201ENST00000427497 RBM19Q9Y4C8 960 aaKnown RBP22.4■■□□□ 1.18
AC055811.2-201ENST00000427497 HMMRO75330 724 aa22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 DNAJC10Q8IXB1 793 aa22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 RTCBQ9Y3I0 505 aaKnown RBP22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 CNTNAP4Q9C0A0 1308 aa22.39■■□□□ 1.18
AC055811.2-201ENST00000427497 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.17
AC055811.2-201ENST00000427497 PDE4AP27815 886 aa22.39■■□□□ 1.17
AC055811.2-201ENST00000427497 CHD1LQ86WJ1 897 aa22.39■■□□□ 1.17
AC055811.2-201ENST00000427497 PLBD2Q8NHP8 589 aa22.39■■□□□ 1.17
AC055811.2-201ENST00000427497 IGKV5-2P06315 115 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms