RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 RGL2O15211 777 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 MS4A1P11836 297 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
HDLBP-209ENST00000422933 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
HDLBP-209ENST00000422933 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-209ENST00000422933 PTPRCP08575 1304 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 ANXA1P04083 346 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 FLIIQ13045 1269 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 PDIA6Q15084 440 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 CLEC4GQ6UXB4 293 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
HDLBP-209ENST00000422933 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
HDLBP-209ENST00000422933 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
HDLBP-209ENST00000422933 NPHP1O15259 732 aa12.68□□□□□ -0.38
HDLBP-209ENST00000422933 COL23A1Q86Y22 540 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-209ENST00000422933 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
HDLBP-209ENST00000422933 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-209ENST00000422933 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
HDLBP-209ENST00000422933 API5Q9BZZ5 524 aaKnown RBP12.68□□□□□ -0.38
HDLBP-209ENST00000422933 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
HDLBP-209ENST00000422933 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
HDLBP-209ENST00000422933 POLD1P28340 1107 aa12.67□□□□□ -0.38
HDLBP-209ENST00000422933 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-209ENST00000422933 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
HDLBP-209ENST00000422933 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
HDLBP-209ENST00000422933 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
HDLBP-209ENST00000422933 ZNF784Q8NCA9 323 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-209ENST00000422933 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-209ENST00000422933 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
HDLBP-209ENST00000422933 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
HDLBP-209ENST00000422933 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
HDLBP-209ENST00000422933 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
HDLBP-209ENST00000422933 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
HDLBP-209ENST00000422933 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
HDLBP-209ENST00000422933 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
HDLBP-209ENST00000422933 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-209ENST00000422933 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
HDLBP-209ENST00000422933 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
HDLBP-209ENST00000422933 MAP3K2Q9Y2U5 619 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
HDLBP-209ENST00000422933 NUP98P52948 1817 aa12.65□□□□□ -0.39
HDLBP-209ENST00000422933 BCAR3O75815 825 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 GYS1P13807 737 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 HSP90B1P14625 803 aaKnown RBP12.64□□□□□ -0.39
HDLBP-209ENST00000422933 PARP10Q53GL7 1025 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 G2E3Q7L622 706 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
HDLBP-209ENST00000422933 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
HDLBP-209ENST00000422933 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDLBP-209ENST00000422933 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
HDLBP-209ENST00000422933 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
HDLBP-209ENST00000422933 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
HDLBP-209ENST00000422933 LRP10Q7Z4F1 713 aa12.63□□□□□ -0.39
HDLBP-209ENST00000422933 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-209ENST00000422933 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
HDLBP-209ENST00000422933 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
HDLBP-209ENST00000422933 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
HDLBP-209ENST00000422933 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
HDLBP-209ENST00000422933 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
HDLBP-209ENST00000422933 MYD88Q99836 296 aa12.62□□□□□ -0.39
HDLBP-209ENST00000422933 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
HDLBP-209ENST00000422933 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 CARMIL3Q8ND23 1372 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 FKBP8Q14318 412 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 HLFQ16534 295 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-209ENST00000422933 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-209ENST00000422933 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
HDLBP-209ENST00000422933 MMP10P09238 476 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 GPTP24298 496 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 ST5P78524 1137 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 TRIM28Q13263 835 aaKnown RBP12.6□□□□□ -0.39
HDLBP-209ENST00000422933 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
HDLBP-209ENST00000422933 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
HDLBP-209ENST00000422933 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-209ENST00000422933 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
HDLBP-209ENST00000422933 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
HDLBP-209ENST00000422933 F6X3S4 739 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms