RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 BMP2KLQ5H9B9 411 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
CHRD-204ENST00000420973 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 CABP4P57796 275 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 ZKSCAN5Q9Y2L8 839 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 SSH2Q76I76 1423 aa17.45■□□□□ 0.38
CHRD-204ENST00000420973 USP44Q9H0E7 712 aa17.44■□□□□ 0.38
CHRD-204ENST00000420973 ADGRL3Q9HAR2 1447 aa17.44■□□□□ 0.38
CHRD-204ENST00000420973 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
CHRD-204ENST00000420973 LARP6Q9BRS8 491 aaKnown RBP17.44■□□□□ 0.38
CHRD-204ENST00000420973 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
CHRD-204ENST00000420973 AMOTQ4VCS5 1084 aa17.43■□□□□ 0.38
CHRD-204ENST00000420973 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
CHRD-204ENST00000420973 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
CHRD-204ENST00000420973 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
CHRD-204ENST00000420973 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
CHRD-204ENST00000420973 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 MYD88Q99836 296 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 NUTM2BA6NNL0 878 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 NUTM2EB1AL46 878 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
CHRD-204ENST00000420973 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
CHRD-204ENST00000420973 ERBB3P21860 1342 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 KDRP35968 1356 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 PDE1AP54750 535 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 MX1P20591 662 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
CHRD-204ENST00000420973 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
CHRD-204ENST00000420973 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
CHRD-204ENST00000420973 HMGN5P82970 282 aaKnown RBP17.4■□□□□ 0.38
CHRD-204ENST00000420973 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
CHRD-204ENST00000420973 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
CHRD-204ENST00000420973 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
CHRD-204ENST00000420973 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
CHRD-204ENST00000420973 NEXNQ0ZGT2 675 aa17.38■□□□□ 0.37
CHRD-204ENST00000420973 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
CHRD-204ENST00000420973 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
CHRD-204ENST00000420973 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
CHRD-204ENST00000420973 CAVIN1Q6NZI2 390 aaKnown RBP17.37■□□□□ 0.37
CHRD-204ENST00000420973 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 HOMEZQ8IX15 550 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 CCDC39Q9UFE4 941 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
CHRD-204ENST00000420973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHRD-204ENST00000420973 NEK4P51957 841 aa17.36■□□□□ 0.37
CHRD-204ENST00000420973 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
CHRD-204ENST00000420973 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
CHRD-204ENST00000420973 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
CHRD-204ENST00000420973 DDX58O95786 925 aaKnown RBP17.35■□□□□ 0.37
CHRD-204ENST00000420973 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
CHRD-204ENST00000420973 PRR29P0C7W0 189 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
CHRD-204ENST00000420973 HS1BP3Q53T59 392 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
CHRD-204ENST00000420973 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
CHRD-204ENST00000420973 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 CYP27B1O15528 508 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 AACSQ86V21 672 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 CALCOCO1Q9P1Z2 691 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
CHRD-204ENST00000420973 RHPN1Q8TCX5 695 aa17.34■□□□□ 0.37
CHRD-204ENST00000420973 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.37
CHRD-204ENST00000420973 A1BGP04217 495 aa17.33■□□□□ 0.36
CHRD-204ENST00000420973 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
CHRD-204ENST00000420973 PHKG2P15735 406 aa17.33■□□□□ 0.36
CHRD-204ENST00000420973 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.36
CHRD-204ENST00000420973 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
CHRD-204ENST00000420973 CHAMP1Q96JM3 812 aa17.32■□□□□ 0.36
CHRD-204ENST00000420973 PXDNQ92626 1479 aa17.32■□□□□ 0.36
CHRD-204ENST00000420973 ERC2O15083 957 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 REC8O95072 547 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 RGS12O14924 1447 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 BEND3Q5T5X7 828 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 PRIMPOLQ96LW4 560 aa17.31■□□□□ 0.36
CHRD-204ENST00000420973 BICC1Q9H694 974 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms