RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 COL26A1Q96A83 441 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 STXBP5LQ9Y2K9 1186 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 V9GY48 417 aaPredicted RBP6.12□□□□□ -1.43
CNGA1-203ENST00000420489 ADAMTSL1Q8N6G6 1762 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 TMEM88BA6NKF7 163 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 METTL3Q86U44 580 aaKnown RBP6.12□□□□□ -1.43
CNGA1-203ENST00000420489 IGSF1Q8N6C5 1336 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 EIF3AQ14152 1382 aaKnown RBP6.12□□□□□ -1.43
CNGA1-203ENST00000420489 ZPR1O75312 459 aa6.12□□□□□ -1.43
CNGA1-203ENST00000420489 LAMB4A4D0S4 1761 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 CFHP08603 1231 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 TSPY4P0CV99 314 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 TSPY10P0CW01 314 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 SCN4AP35499 1836 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 GPR37O15354 613 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 DGKZQ13574 1117 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 GRIPAP1Q4V328 841 aa6.11□□□□□ -1.43
CNGA1-203ENST00000420489 WDR33Q9C0J8 1336 aaKnown RBP6.11□□□□□ -1.43
CNGA1-203ENST00000420489 NAIPQ13075 1403 aa6.1□□□□□ -1.43
CNGA1-203ENST00000420489 MINK1Q8N4C8 1332 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-203ENST00000420489 CRB1P82279 1406 aa6.1□□□□□ -1.43
CNGA1-203ENST00000420489 CFAP65Q6ZU64 1925 aaKnown RBP6.1□□□□□ -1.43
CNGA1-203ENST00000420489 CAPN2P17655 700 aa6.1□□□□□ -1.43
CNGA1-203ENST00000420489 MAP2K5Q13163 448 aa6.1□□□□□ -1.43
CNGA1-203ENST00000420489 METP08581 1390 aa6.1□□□□□ -1.43
CNGA1-203ENST00000420489 PPLO60437 1756 aa6.09□□□□□ -1.43
CNGA1-203ENST00000420489 BRPF1P55201 1214 aaPredicted RBP6.09□□□□□ -1.43
CNGA1-203ENST00000420489 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
CNGA1-203ENST00000420489 BTAF1O14981 1849 aa6.09□□□□□ -1.43
CNGA1-203ENST00000420489 SBF1O95248 1867 aa6.09□□□□□ -1.43
CNGA1-203ENST00000420489 TIAM2Q8IVF5 1701 aa6.09□□□□□ -1.44
CNGA1-203ENST00000420489 GLTPD2A6NH11 291 aa6.08□□□□□ -1.44
CNGA1-203ENST00000420489 ESCO1Q5FWF5 840 aa6.08□□□□□ -1.44
CNGA1-203ENST00000420489 NOM1Q5C9Z4 860 aaKnown RBP6.08□□□□□ -1.44
CNGA1-203ENST00000420489 ZNF777Q9ULD5 760 aaPredicted RBP6.08□□□□□ -1.44
CNGA1-203ENST00000420489 ADH1BP00325 375 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 COPS2P61201 443 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 DEFB115Q30KQ5 88 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 PPP1R18Q6NYC8 613 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 ITSN1Q15811 1721 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 INTS3Q68E01 1043 aaKnown RBP6.07□□□□□ -1.44
CNGA1-203ENST00000420489 RDH13Q8NBN7 331 aa6.07□□□□□ -1.44
CNGA1-203ENST00000420489 FAM182BQ5T319 152 aa6.06□□□□□ -1.44
CNGA1-203ENST00000420489 BLOC1S3Q6QNY0 202 aa6.06□□□□□ -1.44
CNGA1-203ENST00000420489 ROBO2Q9HCK4 1378 aa6.06□□□□□ -1.44
CNGA1-203ENST00000420489 LDHDQ86WU2 507 aa6.06□□□□□ -1.44
CNGA1-203ENST00000420489 MKRN1Q9UHC7 482 aaKnown RBP6.06□□□□□ -1.44
CNGA1-203ENST00000420489 KIF1BO60333 1816 aa6.06□□□□□ -1.44
CNGA1-203ENST00000420489 USP46P62068 366 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 C9orf131Q5VYM1 1079 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 ZNF516Q92618 1163 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 SALL2Q9Y467 1007 aaPredicted RBP6.05□□□□□ -1.44
CNGA1-203ENST00000420489 SLC10A3P09131 477 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 ZNF827Q17R98 1081 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 ANKLE1Q8NAG6 615 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 DICER1Q9UPY3 1922 aaKnown RBP6.05□□□□□ -1.44
CNGA1-203ENST00000420489 EP400Q96L91 3159 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 ATP6V1AP38606 617 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 GCGRP47871 477 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 Q3C1V9 767 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 DCAF5Q96JK2 942 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 KCNH6Q9H252 994 aa6.05□□□□□ -1.44
CNGA1-203ENST00000420489 IRF6O14896 467 aa6.04□□□□□ -1.44
CNGA1-203ENST00000420489 FOXO3O43524 673 aa6.04□□□□□ -1.44
CNGA1-203ENST00000420489 CTU1Q7Z7A3 348 aaKnown RBP6.04□□□□□ -1.44
CNGA1-203ENST00000420489 PRKD2Q9BZL6 878 aa6.04□□□□□ -1.44
CNGA1-203ENST00000420489 NRG2O14511 850 aaPredicted RBP6.04□□□□□ -1.44
CNGA1-203ENST00000420489 DDX11L8A8MPP1 907 aa6.03□□□□□ -1.44
CNGA1-203ENST00000420489 FMNL1O95466 1100 aaPredicted RBP6.03□□□□□ -1.44
CNGA1-203ENST00000420489 COL5A2P05997 1499 aaPredicted RBP6.03□□□□□ -1.44
CNGA1-203ENST00000420489 CLCN1P35523 988 aa6.03□□□□□ -1.44
CNGA1-203ENST00000420489 LMOD2Q6P5Q4 547 aa6.03□□□□□ -1.44
CNGA1-203ENST00000420489 SLC6A16Q9GZN6 736 aa6.03□□□□□ -1.44
CNGA1-203ENST00000420489 PRO3102Q9H379 93 aa6.03□□□□□ -1.44
CNGA1-203ENST00000420489 FECHP22830 423 aa6.02□□□□□ -1.45
CNGA1-203ENST00000420489 DDB1Q16531 1140 aa6.02□□□□□ -1.45
CNGA1-203ENST00000420489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.02□□□□□ -1.45
CNGA1-203ENST00000420489 CCDC7Q96M83 1385 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 MAP3K11Q16584 847 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 MORN1Q5T089 497 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 C5P01031 1676 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 ABCC11Q96J66 1382 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 FAM109BQ6ICB4 259 aaPredicted RBP6.01□□□□□ -1.45
CNGA1-203ENST00000420489 KRI1Q8N9T8 703 aaKnown RBP6.01□□□□□ -1.45
CNGA1-203ENST00000420489 NKX2-3Q8TAU0 364 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 PRDM11Q9NQV5 511 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 TRPM7Q96QT4 1865 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 RPGRIP1LQ68CZ1 1315 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 PRR36Q9H6K5 1346 aa6.01□□□□□ -1.45
CNGA1-203ENST00000420489 MYOM3Q5VTT5 1437 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 SLC19A1P41440 591 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 SOX10P56693 466 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 SCUBE3Q8IX30 993 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 SPSB2Q99619 263 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 GPRASP1Q5JY77 1395 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 DLEC1Q9Y238 1755 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 IQCA1LA6NCM1 817 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 CD46P15529 392 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 RPIAP49247 311 aa6□□□□□ -1.45
CNGA1-203ENST00000420489 KIF7Q2M1P5 1343 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms