RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CHRNA5P30532 468 aa27.85■■■□□ 2.05
CPNE1-211ENST00000420363 CARMIL3Q8ND23 1372 aa27.85■■■□□ 2.05
CPNE1-211ENST00000420363 GNAI1P63096 354 aa27.84■■■□□ 2.05
CPNE1-211ENST00000420363 C9orf131Q5VYM1 1079 aa27.84■■■□□ 2.05
CPNE1-211ENST00000420363 CLEC4GQ6UXB4 293 aa27.84■■■□□ 2.05
CPNE1-211ENST00000420363 ZNF652Q9Y2D9 606 aa27.84■■■□□ 2.05
CPNE1-211ENST00000420363 LAS1LQ9Y4W2 734 aaKnown RBP27.84■■■□□ 2.05
CPNE1-211ENST00000420363 TBC1D9BQ66K14 1250 aa27.82■■■□□ 2.04
CPNE1-211ENST00000420363 MBIPQ9NS73 344 aa27.82■■■□□ 2.04
CPNE1-211ENST00000420363 TOMM70O94826 608 aa27.8■■■□□ 2.04
CPNE1-211ENST00000420363 SERPINB2P05120 415 aa27.8■■■□□ 2.04
CPNE1-211ENST00000420363 DLEC1Q9Y238 1755 aa27.8■■■□□ 2.04
CPNE1-211ENST00000420363 WWC1Q8IX03 1113 aa27.79■■■□□ 2.04
CPNE1-211ENST00000420363 NUP98P52948 1817 aa27.78■■■□□ 2.04
CPNE1-211ENST00000420363 NMRK2Q9NPI5 230 aa27.78■■■□□ 2.04
CPNE1-211ENST00000420363 IL16Q14005 1332 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 ERVV-1B6SEH8 477 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 BICDL1Q6ZP65 573 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 LRP10Q7Z4F1 713 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 NGEFQ8N5V2 710 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 SETDB2Q96T68 719 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 RNF181Q9P0P0 153 aa27.77■■■□□ 2.04
CPNE1-211ENST00000420363 MAP3K15Q6ZN16 1313 aa27.76■■■□□ 2.03
CPNE1-211ENST00000420363 EIF2S2P20042 333 aaKnown RBP27.76■■■□□ 2.03
CPNE1-211ENST00000420363 PDIA6Q15084 440 aa27.76■■■□□ 2.03
CPNE1-211ENST00000420363 KRT24Q2M2I5 525 aa27.76■■■□□ 2.03
CPNE1-211ENST00000420363 KIF6Q6ZMV9 814 aa27.76■■■□□ 2.03
CPNE1-211ENST00000420363 ANKRD31Q8N7Z5 1873 aa27.76■■■□□ 2.03
CPNE1-211ENST00000420363 MYL6BP14649 208 aa27.75■■■□□ 2.03
CPNE1-211ENST00000420363 FAM9BQ8IZU0 186 aa27.75■■■□□ 2.03
CPNE1-211ENST00000420363 ARFGEF1Q9Y6D6 1849 aa27.75■■■□□ 2.03
CPNE1-211ENST00000420363 C16orf71Q8IYS4 520 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-211ENST00000420363 APLP1P51693 650 aa27.73■■■□□ 2.03
CPNE1-211ENST00000420363 HDGFL1Q5TGJ6 251 aa27.73■■■□□ 2.03
CPNE1-211ENST00000420363 DUSP27Q5VZP5 1158 aa27.73■■■□□ 2.03
CPNE1-211ENST00000420363 DDX21Q9NR30 783 aaKnown RBP eCLIP27.73■■■□□ 2.03
CPNE1-211ENST00000420363 KDM2BQ8NHM5 1336 aa27.72■■■□□ 2.03
CPNE1-211ENST00000420363 CCER2I3L3R5 266 aa27.72■■■□□ 2.03
CPNE1-211ENST00000420363 TTLL7Q6ZT98 887 aa27.72■■■□□ 2.03
CPNE1-211ENST00000420363 PROSER3Q2NL68 480 aa27.71■■■□□ 2.03
CPNE1-211ENST00000420363 PRR5LQ6MZQ0 368 aa27.71■■■□□ 2.03
CPNE1-211ENST00000420363 CNBD1Q8NA66 436 aa27.71■■■□□ 2.03
CPNE1-211ENST00000420363 ANKRD36CQ5JPF3 1778 aa27.71■■■□□ 2.03
CPNE1-211ENST00000420363 HLFQ16534 295 aa27.7■■■□□ 2.02
CPNE1-211ENST00000420363 C2CD5Q86YS7 1000 aa27.7■■■□□ 2.02
CPNE1-211ENST00000420363 TTLL6Q8N841 843 aa27.7■■■□□ 2.02
CPNE1-211ENST00000420363 PDZRN3Q9UPQ7 1066 aa27.7■■■□□ 2.02
CPNE1-211ENST00000420363 IBTKQ9P2D0 1353 aaPredicted RBP27.7■■■□□ 2.02
CPNE1-211ENST00000420363 H0YIN7 160 aa27.69■■■□□ 2.02
CPNE1-211ENST00000420363 WDR63Q8IWG1 891 aa27.69■■■□□ 2.02
CPNE1-211ENST00000420363 NIP7Q9Y221 180 aaKnown RBP eCLIP27.69■■■□□ 2.02
CPNE1-211ENST00000420363 COL11A2P13942 1736 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-211ENST00000420363 ST5P78524 1137 aa27.68■■■□□ 2.02
CPNE1-211ENST00000420363 RBM46Q8TBY0 533 aaKnown RBP27.68■■■□□ 2.02
CPNE1-211ENST00000420363 BRIP1Q9BX63 1249 aa27.68■■■□□ 2.02
CPNE1-211ENST00000420363 CHMP4AQ9BY43 222 aa27.68■■■□□ 2.02
CPNE1-211ENST00000420363 CHPF2Q9P2E5 772 aa27.68■■■□□ 2.02
CPNE1-211ENST00000420363 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-211ENST00000420363 NBPF5PQ86XG9 351 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-211ENST00000420363 NECTIN2Q92692 538 aa27.67■■■□□ 2.02
CPNE1-211ENST00000420363 ANXA1P04083 346 aa27.66■■■□□ 2.02
CPNE1-211ENST00000420363 GIGYF2Q6Y7W6 1299 aaKnown RBP27.66■■■□□ 2.02
CPNE1-211ENST00000420363 ZBTB3Q9H5J0 574 aa27.66■■■□□ 2.02
CPNE1-211ENST00000420363 RRAGCQ9HB90 399 aa27.66■■■□□ 2.02
CPNE1-211ENST00000420363 PDE6BP35913 854 aa27.65■■■□□ 2.02
CPNE1-211ENST00000420363 RASSF7Q02833 373 aa27.65■■■□□ 2.02
CPNE1-211ENST00000420363 NPHP1O15259 732 aa27.64■■■□□ 2.02
CPNE1-211ENST00000420363 LMNB1P20700 586 aa27.64■■■□□ 2.02
CPNE1-211ENST00000420363 IFFO2Q5TF58 517 aa27.64■■■□□ 2.02
CPNE1-211ENST00000420363 TPTE2Q6XPS3 522 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 COPS6Q7L5N1 327 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 C8orf58Q8NAV2 365 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 XAGE3Q8WTP9 111 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 TSR2Q969E8 191 aaKnown RBP27.63■■■□□ 2.01
CPNE1-211ENST00000420363 HYPKQ9NX55 129 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 RIC1Q4ADV7 1423 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 ARFGEF2Q9Y6D5 1785 aa27.63■■■□□ 2.01
CPNE1-211ENST00000420363 ZNF34Q8IZ26 560 aa27.62■■■□□ 2.01
CPNE1-211ENST00000420363 ZNF622Q969S3 477 aaKnown RBP eCLIP27.62■■■□□ 2.012e-6■■■□□ 15.2
CPNE1-211ENST00000420363 NYXQ9GZU5 481 aa27.62■■■□□ 2.01
CPNE1-211ENST00000420363 FANCIQ9NVI1 1328 aa27.62■■■□□ 2.01
CPNE1-211ENST00000420363 FSTL1Q12841 308 aa27.61■■■□□ 2.01
CPNE1-211ENST00000420363 HSP90AB3PQ58FF7 597 aa27.61■■■□□ 2.01
CPNE1-211ENST00000420363 UBN2Q6ZU65 1347 aa27.61■■■□□ 2.01
CPNE1-211ENST00000420363 ZC3H4Q9UPT8 1303 aaKnown RBP27.61■■■□□ 2.01
CPNE1-211ENST00000420363 PARP10Q53GL7 1025 aa27.6■■■□□ 2.01
CPNE1-211ENST00000420363 ZNF521Q96K83 1311 aa27.6■■■□□ 2.01
CPNE1-211ENST00000420363 DNAJC5GQ8N7S2 189 aa27.59■■■□□ 2.01
CPNE1-211ENST00000420363 SALL2Q9Y467 1007 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-211ENST00000420363 TNRC6CQ9HCJ0 1690 aaKnown RBP27.59■■■□□ 2.01
CPNE1-211ENST00000420363 SBF1O95248 1867 aa27.58■■■□□ 2.01
CPNE1-211ENST00000420363 ELL2O00472 640 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-211ENST00000420363 AIMP1Q12904 312 aaKnown RBP27.58■■■□□ 2.01
CPNE1-211ENST00000420363 CCDC30Q5VVM6 783 aa27.58■■■□□ 2.01
CPNE1-211ENST00000420363 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
CPNE1-211ENST00000420363 CCDC24Q8N4L8 307 aa27.58■■■□□ 2.01
CPNE1-211ENST00000420363 TSPYL6Q8N831 410 aa27.58■■■□□ 2.01
CPNE1-211ENST00000420363 KLRG2A4D1S0 409 aaPredicted RBP27.57■■■□□ 2
CPNE1-211ENST00000420363 PLBD2Q8NHP8 589 aa27.57■■■□□ 2
CPNE1-211ENST00000420363 RNF123Q5XPI4 1314 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms