RNA–Protein interactions for RNA: ENST00000419642.1

ZDHHC3-204, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 5

Gene ZDHHC3, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-204ENST00000419642 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
ZDHHC3-204ENST00000419642 HEG1Q9ULI3 1381 aa18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 THSD7BQ9C0I4 1608 aa18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 TRPM7Q96QT4 1865 aa18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 IL6STP40189 918 aaPredicted RBP18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 TEX13AQ9BXU3 409 aaPredicted RBP18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
ZDHHC3-204ENST00000419642 RASSF10A6NK89 507 aa18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 HSPA8P11142 646 aaKnown RBP18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 ZNF496Q96IT1 587 aaPredicted RBP18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 HACL1Q9UJ83 578 aa18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
ZDHHC3-204ENST00000419642 DEFB115Q30KQ5 88 aa18.7■□□□□ 0.58
ZDHHC3-204ENST00000419642 CCDC93Q567U6 631 aa18.7■□□□□ 0.58
ZDHHC3-204ENST00000419642 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
ZDHHC3-204ENST00000419642 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
ZDHHC3-204ENST00000419642 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
ZDHHC3-204ENST00000419642 EPHX2P34913 555 aa18.69■□□□□ 0.58
ZDHHC3-204ENST00000419642 MAP2K1Q02750 393 aaPredicted RBP18.69■□□□□ 0.58
ZDHHC3-204ENST00000419642 C7orf43Q8WVR3 580 aa18.69■□□□□ 0.58
ZDHHC3-204ENST00000419642 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
ZDHHC3-204ENST00000419642 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
ZDHHC3-204ENST00000419642 ZNF790Q6PG37 636 aa18.68■□□□□ 0.58
ZDHHC3-204ENST00000419642 PNMA8AQ86V59 439 aaPredicted RBP18.68■□□□□ 0.58
ZDHHC3-204ENST00000419642 TEFQ10587 303 aa18.67■□□□□ 0.58
ZDHHC3-204ENST00000419642 WDR33Q9C0J8 1336 aaKnown RBP18.67■□□□□ 0.58
ZDHHC3-204ENST00000419642 EIF4G2P78344 907 aaKnown RBP eCLIP18.66■□□□□ 0.58
ZDHHC3-204ENST00000419642 CNTROBQ8N137 903 aa18.66■□□□□ 0.58
ZDHHC3-204ENST00000419642 ZNF277Q9NRM2 450 aaPredicted RBP18.66■□□□□ 0.58
ZDHHC3-204ENST00000419642 A1BGP04217 495 aa18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 NPR1P16066 1061 aa18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 ABT1Q9ULW3 272 aaKnown RBP18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
ZDHHC3-204ENST00000419642 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
ZDHHC3-204ENST00000419642 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.57
ZDHHC3-204ENST00000419642 RTKN2Q8IZC4 609 aa18.64■□□□□ 0.57
ZDHHC3-204ENST00000419642 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.57
ZDHHC3-204ENST00000419642 DIAPH1O60610 1272 aaKnown RBP18.63■□□□□ 0.57
ZDHHC3-204ENST00000419642 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
ZDHHC3-204ENST00000419642 LTBP1Q14766 1721 aa18.63■□□□□ 0.57
ZDHHC3-204ENST00000419642 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 FZD9O00144 591 aa18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 CLEC4GQ6UXB4 293 aa18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 GPC2Q8N158 579 aa18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
ZDHHC3-204ENST00000419642 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
ZDHHC3-204ENST00000419642 CCDC85CA6NKD9 419 aa18.61■□□□□ 0.57
ZDHHC3-204ENST00000419642 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
ZDHHC3-204ENST00000419642 ZNF652Q9Y2D9 606 aa18.61■□□□□ 0.57
ZDHHC3-204ENST00000419642 RGS19P49795 217 aa18.6■□□□□ 0.57
ZDHHC3-204ENST00000419642 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
ZDHHC3-204ENST00000419642 GAS2L2Q8NHY3 880 aa18.6■□□□□ 0.57
ZDHHC3-204ENST00000419642 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
ZDHHC3-204ENST00000419642 CASP8AP2Q9UKL3 1982 aa18.59■□□□□ 0.57
ZDHHC3-204ENST00000419642 ECE1P42892 770 aa18.59■□□□□ 0.57
ZDHHC3-204ENST00000419642 TPTE2Q6XPS3 522 aa18.59■□□□□ 0.57
ZDHHC3-204ENST00000419642 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
ZDHHC3-204ENST00000419642 PCDH10Q9P2E7 1040 aa18.59■□□□□ 0.57
ZDHHC3-204ENST00000419642 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
ZDHHC3-204ENST00000419642 PAXIP1Q6ZW49 1069 aaPredicted RBP18.58■□□□□ 0.56
ZDHHC3-204ENST00000419642 JDP2Q8WYK2 163 aa18.58■□□□□ 0.56
ZDHHC3-204ENST00000419642 CAPNS2Q96L46 248 aa18.58■□□□□ 0.56
ZDHHC3-204ENST00000419642 NUP98P52948 1817 aa18.58■□□□□ 0.56
ZDHHC3-204ENST00000419642 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
ZDHHC3-204ENST00000419642 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
ZDHHC3-204ENST00000419642 LMOD1P29536 600 aaPredicted RBP18.57■□□□□ 0.56
ZDHHC3-204ENST00000419642 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
ZDHHC3-204ENST00000419642 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
ZDHHC3-204ENST00000419642 LAMB4A4D0S4 1761 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 RGL2O15211 777 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 EIF6P56537 245 aaKnown RBP18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 GPR101Q96P66 508 aaPredicted RBP18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 PSMD1Q99460 953 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 COL4A5P29400 1685 aa18.56■□□□□ 0.56
ZDHHC3-204ENST00000419642 KCNQ3O43525 872 aa18.55■□□□□ 0.56
ZDHHC3-204ENST00000419642 CYP4F22Q6NT55 531 aa18.55■□□□□ 0.56
ZDHHC3-204ENST00000419642 GJA3Q9Y6H8 435 aa18.55■□□□□ 0.56
ZDHHC3-204ENST00000419642 GRM1Q13255 1194 aa18.54■□□□□ 0.56
ZDHHC3-204ENST00000419642 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
ZDHHC3-204ENST00000419642 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
ZDHHC3-204ENST00000419642 FMR1Q06787 632 aaKnown RBP eCLIP18.53■□□□□ 0.56
ZDHHC3-204ENST00000419642 CC2D2BQ6DHV5 1058 aa18.53■□□□□ 0.56
ZDHHC3-204ENST00000419642 MAP2K2P36507 400 aa18.52■□□□□ 0.56
ZDHHC3-204ENST00000419642 SCNN1DP51172 638 aa18.52■□□□□ 0.56
ZDHHC3-204ENST00000419642 USP50Q70EL3 339 aaPredicted RBP18.52■□□□□ 0.56
ZDHHC3-204ENST00000419642 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.56
ZDHHC3-204ENST00000419642 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
ZDHHC3-204ENST00000419642 PRAMEF22A3QJZ6 481 aa18.51■□□□□ 0.55
ZDHHC3-204ENST00000419642 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
ZDHHC3-204ENST00000419642 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
ZDHHC3-204ENST00000419642 EPS15P42566 896 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms