RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
TMEM248-203ENST00000418375 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
TMEM248-203ENST00000418375 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
TMEM248-203ENST00000418375 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
TMEM248-203ENST00000418375 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
TMEM248-203ENST00000418375 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
TMEM248-203ENST00000418375 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
TMEM248-203ENST00000418375 CHRNA5P30532 468 aa17.25■□□□□ 0.35
TMEM248-203ENST00000418375 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
TMEM248-203ENST00000418375 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
TMEM248-203ENST00000418375 DZIP3Q86Y13 1208 aaKnown RBP17.25■□□□□ 0.35
TMEM248-203ENST00000418375 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
TMEM248-203ENST00000418375 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
TMEM248-203ENST00000418375 SERPINB2P05120 415 aa17.24■□□□□ 0.35
TMEM248-203ENST00000418375 MYL6BP14649 208 aa17.24■□□□□ 0.35
TMEM248-203ENST00000418375 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
TMEM248-203ENST00000418375 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
TMEM248-203ENST00000418375 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
TMEM248-203ENST00000418375 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
TMEM248-203ENST00000418375 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
TMEM248-203ENST00000418375 CAMTA2O94983 1202 aa17.22■□□□□ 0.35
TMEM248-203ENST00000418375 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
TMEM248-203ENST00000418375 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
TMEM248-203ENST00000418375 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
TMEM248-203ENST00000418375 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
TMEM248-203ENST00000418375 PDIA6Q15084 440 aa17.21■□□□□ 0.35
TMEM248-203ENST00000418375 DBF4Q9UBU7 674 aaPredicted RBP17.21■□□□□ 0.35
TMEM248-203ENST00000418375 E9PSI1 815 aa17.2■□□□□ 0.34
TMEM248-203ENST00000418375 RGL2O15211 777 aa17.2■□□□□ 0.34
TMEM248-203ENST00000418375 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
TMEM248-203ENST00000418375 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
TMEM248-203ENST00000418375 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
TMEM248-203ENST00000418375 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
TMEM248-203ENST00000418375 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
TMEM248-203ENST00000418375 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
TMEM248-203ENST00000418375 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
TMEM248-203ENST00000418375 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
TMEM248-203ENST00000418375 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
TMEM248-203ENST00000418375 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 ANXA1P04083 346 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 HYPKQ9NX55 129 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
TMEM248-203ENST00000418375 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
TMEM248-203ENST00000418375 KIF3CO14782 793 aa17.17■□□□□ 0.34
TMEM248-203ENST00000418375 HNRNPUQ00839 825 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM248-203ENST00000418375 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
TMEM248-203ENST00000418375 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
TMEM248-203ENST00000418375 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 H0YIN7 160 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
TMEM248-203ENST00000418375 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
TMEM248-203ENST00000418375 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
TMEM248-203ENST00000418375 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
TMEM248-203ENST00000418375 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.34
TMEM248-203ENST00000418375 VAMP4O75379 141 aa17.14■□□□□ 0.33
TMEM248-203ENST00000418375 HLFQ16534 295 aa17.14■□□□□ 0.33
TMEM248-203ENST00000418375 PRR5LQ6MZQ0 368 aa17.14■□□□□ 0.33
TMEM248-203ENST00000418375 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.33
TMEM248-203ENST00000418375 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
TMEM248-203ENST00000418375 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
TMEM248-203ENST00000418375 NPHP1O15259 732 aa17.13■□□□□ 0.33
TMEM248-203ENST00000418375 PDE6BP35913 854 aa17.13■□□□□ 0.33
TMEM248-203ENST00000418375 GIGYF2Q6Y7W6 1299 aaKnown RBP17.13■□□□□ 0.33
TMEM248-203ENST00000418375 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
TMEM248-203ENST00000418375 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
TMEM248-203ENST00000418375 HSPA6P17066 643 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
TMEM248-203ENST00000418375 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
TMEM248-203ENST00000418375 DDX58O95786 925 aaKnown RBP17.11■□□□□ 0.33
TMEM248-203ENST00000418375 RASSF7Q02833 373 aa17.11■□□□□ 0.33
TMEM248-203ENST00000418375 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
TMEM248-203ENST00000418375 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
TMEM248-203ENST00000418375 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
TMEM248-203ENST00000418375 TOMM70O94826 608 aa17.1■□□□□ 0.33
TMEM248-203ENST00000418375 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
TMEM248-203ENST00000418375 ST5P78524 1137 aa17.1■□□□□ 0.33
TMEM248-203ENST00000418375 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-203ENST00000418375 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
TMEM248-203ENST00000418375 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
TMEM248-203ENST00000418375 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
TMEM248-203ENST00000418375 LMNB1P20700 586 aa17.09■□□□□ 0.33
TMEM248-203ENST00000418375 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
TMEM248-203ENST00000418375 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
TMEM248-203ENST00000418375 ZBED9Q6R2W3 1325 aa17.08■□□□□ 0.32
TMEM248-203ENST00000418375 GPTP24298 496 aa17.08■□□□□ 0.32
TMEM248-203ENST00000418375 TCIRG1Q13488 830 aa17.08■□□□□ 0.32
TMEM248-203ENST00000418375 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms