RNA–Protein interactions for RNA: ENST00000418189.5

HDAC11-209, Transcript of histone deacetylase 11, human

TSL 5

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC11-209	ENST00000418189	CACNA1S	Q13698	1873 aa		32.67	■■■□□ 2.82
HDAC11-209	ENST00000418189	RRAGC	Q9HB90	399 aa		32.67	■■■□□ 2.82
HDAC11-209	ENST00000418189	NBPF26	B4DH59	902 aa		32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	RGL2	O15211	777 aa		32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	NBPF10	Q6P3W6	841 aa	Known RBP	32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	NBPF15	Q8N660	670 aa		32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	PLEKHF1	Q96S99	279 aa		32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	DICER1	Q9UPY3	1922 aa	Known RBP	32.66	■■■□□ 2.82
HDAC11-209	ENST00000418189	WDR90	Q96KV7	1748 aa		32.65	■■■□□ 2.82
HDAC11-209	ENST00000418189	FSTL1	Q12841	308 aa		32.64	■■■□□ 2.82
HDAC11-209	ENST00000418189	SLX4	Q8IY92	1834 aa		32.64	■■■□□ 2.82
HDAC11-209	ENST00000418189	PNISR	Q8TF01	805 aa	Known RBP	32.64	■■■□□ 2.82
HDAC11-209	ENST00000418189	GLTPD2	A6NH11	291 aa		32.63	■■■□□ 2.81
HDAC11-209	ENST00000418189	STYK1	Q6J9G0	422 aa		32.63	■■■□□ 2.81
HDAC11-209	ENST00000418189	CNKSR1	Q969H4	720 aa		32.63	■■■□□ 2.81
HDAC11-209	ENST00000418189	MIS18A	Q9NYP9	233 aa		32.63	■■■□□ 2.81
HDAC11-209	ENST00000418189	C21orf2	O43822	256 aa		32.62	■■■□□ 2.81
HDAC11-209	ENST00000418189	SRGN	P10124	158 aa		32.62	■■■□□ 2.81
HDAC11-209	ENST00000418189	NFE2L2	Q16236	605 aa		32.62	■■■□□ 2.81
HDAC11-209	ENST00000418189	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.62	■■■□□ 2.81
HDAC11-209	ENST00000418189	MASTL	Q96GX5	879 aa		32.6	■■■□□ 2.81
HDAC11-209	ENST00000418189	PNN	Q9H307	717 aa	Known RBP	32.6	■■■□□ 2.81
HDAC11-209	ENST00000418189	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.6	■■■□□ 2.81
HDAC11-209	ENST00000418189	LTBP3	Q9NS15	1303 aa		32.59	■■■□□ 2.81
HDAC11-209	ENST00000418189	MAPK8IP3	Q9UPT6	1336 aa		32.57	■■■□□ 2.8
HDAC11-209	ENST00000418189	PRPF40B	Q6NWY9	871 aa	Known RBP	32.57	■■■□□ 2.8
HDAC11-209	ENST00000418189	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.57	■■■□□ 2.8
HDAC11-209	ENST00000418189	DNAJC5G	Q8N7S2	189 aa		32.56	■■■□□ 2.8
HDAC11-209	ENST00000418189	VEGFA	P15692	232 aa	Predicted RBP	32.55	■■■□□ 2.8
HDAC11-209	ENST00000418189	EIF4A1	P60842	406 aa	Known RBP	32.55	■■■□□ 2.8
HDAC11-209	ENST00000418189	SOGA3	Q5TF21	947 aa		32.55	■■■□□ 2.8
HDAC11-209	ENST00000418189	TPTE2	Q6XPS3	522 aa		32.55	■■■□□ 2.8
HDAC11-209	ENST00000418189	TAOK3	Q9H2K8	898 aa		32.55	■■■□□ 2.8
HDAC11-209	ENST00000418189	NUP98	P52948	1817 aa		32.54	■■■□□ 2.8
HDAC11-209	ENST00000418189	KLRG2	A4D1S0	409 aa	Predicted RBP	32.54	■■■□□ 2.8
HDAC11-209	ENST00000418189	SMC1B	Q8NDV3	1235 aa		32.54	■■■□□ 2.8
HDAC11-209	ENST00000418189	THUMPD2	Q9BTF0	503 aa	Known RBP	32.54	■■■□□ 2.8
HDAC11-209	ENST00000418189	HLF	Q16534	295 aa		32.53	■■■□□ 2.8
HDAC11-209	ENST00000418189	NPR1	P16066	1061 aa		32.52	■■■□□ 2.8
HDAC11-209	ENST00000418189	RALBP1	Q15311	655 aa		32.52	■■■□□ 2.8
HDAC11-209	ENST00000418189	ERFE	Q4G0M1	354 aa		32.52	■■■□□ 2.8
HDAC11-209	ENST00000418189	DPY19L2	Q6NUT2	758 aa		32.51	■■■□□ 2.79
HDAC11-209	ENST00000418189	ERVV-1	B6SEH8	477 aa		32.49	■■■□□ 2.79
HDAC11-209	ENST00000418189	C7orf43	Q8WVR3	580 aa		32.48	■■■□□ 2.79
HDAC11-209	ENST00000418189	FAM177B	A6PVY3	158 aa		32.47	■■■□□ 2.79
HDAC11-209	ENST00000418189	NGEF	Q8N5V2	710 aa		32.47	■■■□□ 2.79
HDAC11-209	ENST00000418189	MAP3K15	Q6ZN16	1313 aa		32.47	■■■□□ 2.79
HDAC11-209	ENST00000418189	CCDC93	Q567U6	631 aa		32.46	■■■□□ 2.79
HDAC11-209	ENST00000418189	RRP7A	Q9Y3A4	280 aa	Known RBP	32.46	■■■□□ 2.79
HDAC11-209	ENST00000418189	POTEC	B2RU33	542 aa		32.45	■■■□□ 2.79
HDAC11-209	ENST00000418189	KIF6	Q6ZMV9	814 aa		32.45	■■■□□ 2.79
HDAC11-209	ENST00000418189	ERBB4	Q15303	1308 aa		32.45	■■■□□ 2.78
HDAC11-209	ENST00000418189	GTF2E1	P29083	439 aa	Predicted RBP	32.44	■■■□□ 2.78
HDAC11-209	ENST00000418189	HTRA3	P83110	453 aa		32.44	■■■□□ 2.78
HDAC11-209	ENST00000418189	NYX	Q9GZU5	481 aa		32.44	■■■□□ 2.78
HDAC11-209	ENST00000418189	TTLL7	Q6ZT98	887 aa		32.43	■■■□□ 2.78
HDAC11-209	ENST00000418189	MYL6B	P14649	208 aa		32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	RIPK4	P57078	832 aa		32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	IFFO2	Q5TF58	517 aa		32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	KLRG1	Q96E93	195 aa		32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	TSPYL4	Q9UJ04	414 aa		32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.42	■■■□□ 2.78
HDAC11-209	ENST00000418189	ABCC12	Q96J65	1359 aa		32.41	■■■□□ 2.78
HDAC11-209	ENST00000418189	ALDH1B1	P30837	517 aa		32.4	■■■□□ 2.78
HDAC11-209	ENST00000418189	BABAM1	Q9NWV8	329 aa		32.4	■■■□□ 2.78
HDAC11-209	ENST00000418189	RIC1	Q4ADV7	1423 aa		32.4	■■■□□ 2.78
HDAC11-209	ENST00000418189	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
HDAC11-209	ENST00000418189	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.38	■■■□□ 2.77
HDAC11-209	ENST00000418189	TMPO	P42166	694 aa	Known RBP	32.38	■■■□□ 2.77
HDAC11-209	ENST00000418189	LMOD3	Q0VAK6	560 aa		32.38	■■■□□ 2.77
HDAC11-209	ENST00000418189	CRY2	Q49AN0	593 aa		32.38	■■■□□ 2.77
HDAC11-209	ENST00000418189	ZBTB3	Q9H5J0	574 aa		32.38	■■■□□ 2.77
HDAC11-209	ENST00000418189	UBN2	Q6ZU65	1347 aa		32.37	■■■□□ 2.77
HDAC11-209	ENST00000418189	NUTM1	Q86Y26	1132 aa		32.37	■■■□□ 2.77
HDAC11-209	ENST00000418189	RTKN2	Q8IZC4	609 aa		32.37	■■■□□ 2.77
HDAC11-209	ENST00000418189	DDN	O94850	711 aa	Predicted RBP	32.36	■■■□□ 2.77
HDAC11-209	ENST00000418189	DDX10	Q13206	875 aa	Known RBP	32.36	■■■□□ 2.77
HDAC11-209	ENST00000418189	JMY	Q8N9B5	988 aa		32.36	■■■□□ 2.77
HDAC11-209	ENST00000418189	SCN4A	P35499	1836 aa		32.35	■■■□□ 2.77
HDAC11-209	ENST00000418189	GPT	P24298	496 aa		32.35	■■■□□ 2.77
HDAC11-209	ENST00000418189	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.35	■■■□□ 2.77
HDAC11-209	ENST00000418189	OLFM4	Q6UX06	510 aa		32.34	■■■□□ 2.77
HDAC11-209	ENST00000418189	ZNF34	Q8IZ26	560 aa		32.34	■■■□□ 2.77
HDAC11-209	ENST00000418189	LRP10	Q7Z4F1	713 aa		32.33	■■■□□ 2.77
HDAC11-209	ENST00000418189	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.33	■■■□□ 2.77
HDAC11-209	ENST00000418189	SNED1	Q8TER0	1413 aa		32.33	■■■□□ 2.77
HDAC11-209	ENST00000418189	SUSD4	Q5VX71	490 aa		32.32	■■■□□ 2.76
HDAC11-209	ENST00000418189	EIF2S2	P20042	333 aa	Known RBP	32.31	■■■□□ 2.76
HDAC11-209	ENST00000418189	PDIA6	Q15084	440 aa		32.31	■■■□□ 2.76
HDAC11-209	ENST00000418189	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.31	■■■□□ 2.76
HDAC11-209	ENST00000418189	NTSR2	O95665	410 aa		32.3	■■■□□ 2.76
HDAC11-209	ENST00000418189	HOXA10	P31260	410 aa	Predicted RBP	32.3	■■■□□ 2.76
HDAC11-209	ENST00000418189	ANKRD36C	Q5JPF3	1778 aa		32.3	■■■□□ 2.76
HDAC11-209	ENST00000418189	IQCA1L	A6NCM1	817 aa		32.29	■■■□□ 2.76
HDAC11-209	ENST00000418189	RPGR	Q92834	1020 aa	Known RBP	32.29	■■■□□ 2.76
HDAC11-209	ENST00000418189	PARP10	Q53GL7	1025 aa		32.28	■■■□□ 2.76
HDAC11-209	ENST00000418189	CC2D2B	Q6DHV5	1058 aa		32.28	■■■□□ 2.76
HDAC11-209	ENST00000418189	CHADL	Q6NUI6	762 aa		32.28	■■■□□ 2.76
HDAC11-209	ENST00000418189	PPP1R42	Q7Z4L9	355 aa		32.28	■■■□□ 2.76
HDAC11-209	ENST00000418189	SYNE4	Q8N205	404 aa		32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms