RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
TGFBR3-203ENST00000417833 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
TGFBR3-203ENST00000417833 CHMP4AQ9BY43 222 aa17.15■□□□□ 0.34
TGFBR3-203ENST00000417833 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
TGFBR3-203ENST00000417833 APLP1P51693 650 aa17.14■□□□□ 0.33
TGFBR3-203ENST00000417833 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
TGFBR3-203ENST00000417833 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
TGFBR3-203ENST00000417833 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
TGFBR3-203ENST00000417833 MYL6BP14649 208 aa17.13■□□□□ 0.33
TGFBR3-203ENST00000417833 TGFB2P61812 414 aa17.13■□□□□ 0.33
TGFBR3-203ENST00000417833 TBC1D9BQ66K14 1250 aa17.13■□□□□ 0.33
TGFBR3-203ENST00000417833 ZNF521Q96K83 1311 aa17.13■□□□□ 0.33
TGFBR3-203ENST00000417833 SERPINB2P05120 415 aa17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
TGFBR3-203ENST00000417833 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
TGFBR3-203ENST00000417833 SETDB2Q96T68 719 aa17.11■□□□□ 0.33
TGFBR3-203ENST00000417833 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 TTLL7Q6ZT98 887 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 NUP98P52948 1817 aa17.1■□□□□ 0.33
TGFBR3-203ENST00000417833 HLFQ16534 295 aa17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 BICDL1Q6ZP65 573 aa17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
TGFBR3-203ENST00000417833 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 KIF3CO14782 793 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 GOLGA2Q08379 1002 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 GIGYF2Q6Y7W6 1299 aaKnown RBP17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 COPS6Q7L5N1 327 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
TGFBR3-203ENST00000417833 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
TGFBR3-203ENST00000417833 ANXA1P04083 346 aa17.07■□□□□ 0.32
TGFBR3-203ENST00000417833 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
TGFBR3-203ENST00000417833 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
TGFBR3-203ENST00000417833 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
TGFBR3-203ENST00000417833 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
TGFBR3-203ENST00000417833 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
TGFBR3-203ENST00000417833 KCNA3P22001 575 aa17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 ZNF34Q8IZ26 560 aa17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 BRIP1Q9BX63 1249 aa17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 PDZRN3Q9UPQ7 1066 aa17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 N4BP2Q86UW6 1770 aaPredicted RBP17.05■□□□□ 0.32
TGFBR3-203ENST00000417833 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
TGFBR3-203ENST00000417833 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
TGFBR3-203ENST00000417833 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
TGFBR3-203ENST00000417833 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
TGFBR3-203ENST00000417833 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 PCNTO95613 3336 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 E9PSI1 815 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 VAMP4O75379 141 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 DPEP1P16444 411 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
TGFBR3-203ENST00000417833 TOMM70O94826 608 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 PDE6BP35913 854 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 PRELPP51888 382 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
TGFBR3-203ENST00000417833 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
TGFBR3-203ENST00000417833 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
TGFBR3-203ENST00000417833 ANKRD31Q8N7Z5 1873 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 ST5P78524 1137 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 PIM2Q9P1W9 311 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 DLEC1Q9Y238 1755 aa17.01■□□□□ 0.31
TGFBR3-203ENST00000417833 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
TGFBR3-203ENST00000417833 KLRG2A4D1S0 409 aaPredicted RBP17■□□□□ 0.31
TGFBR3-203ENST00000417833 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
TGFBR3-203ENST00000417833 H0YIN7 160 aa16.99■□□□□ 0.31
TGFBR3-203ENST00000417833 CHRNA5P30532 468 aa16.99■□□□□ 0.31
TGFBR3-203ENST00000417833 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
TGFBR3-203ENST00000417833 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
TGFBR3-203ENST00000417833 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
TGFBR3-203ENST00000417833 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
TGFBR3-203ENST00000417833 RIC1Q4ADV7 1423 aa16.98■□□□□ 0.31
TGFBR3-203ENST00000417833 NPHP1O15259 732 aa16.98■□□□□ 0.31
TGFBR3-203ENST00000417833 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms