RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 ZNF541Q9H0D2 1346 aa9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 KCNQ3O43525 872 aa9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 ZNF330Q9Y3S2 320 aaPredicted RBP9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 SCN4AP35499 1836 aa9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 BCORQ6W2J9 1755 aa9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 ADAMTSL1Q8N6G6 1762 aa9.93□□□□□ -0.82
AC007349.3-201ENST00000415356 A1BGP04217 495 aa9.92□□□□□ -0.82
AC007349.3-201ENST00000415356 LBX1P52954 281 aa9.92□□□□□ -0.82
AC007349.3-201ENST00000415356 FMR1Q06787 632 aaKnown RBP eCLIP9.92□□□□□ -0.82
AC007349.3-201ENST00000415356 ZNF496Q96IT1 587 aaPredicted RBP9.92□□□□□ -0.82
AC007349.3-201ENST00000415356 LTBP1Q14766 1721 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 PRAMEF22A3QJZ6 481 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 TAOK3Q9H2K8 898 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 TAF1DQ9H5J8 278 aaPredicted RBP9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 PDE4DIPQ5VU43 2346 aa9.91□□□□□ -0.82
AC007349.3-201ENST00000415356 COL4A5P29400 1685 aa9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 SRGNP10124 158 aa9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 IL17REQ8NFR9 667 aa9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 ZNF277Q9NRM2 450 aaPredicted RBP9.9□□□□□ -0.82
AC007349.3-201ENST00000415356 CASP8AP2Q9UKL3 1982 aa9.9□□□□□ -0.83
AC007349.3-201ENST00000415356 LTBP3Q9NS15 1303 aa9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 HSPA8P11142 646 aaKnown RBP9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 EAPPQ56P03 285 aaPredicted RBP9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 MAP1SQ66K74 1059 aaPredicted RBP9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 WBP1LQ9NX94 342 aa9.89□□□□□ -0.83
AC007349.3-201ENST00000415356 HEG1Q9ULI3 1381 aa9.88□□□□□ -0.83
AC007349.3-201ENST00000415356 PDE6BP35913 854 aa9.88□□□□□ -0.83
AC007349.3-201ENST00000415356 CTCFP49711 727 aaPredicted RBP9.88□□□□□ -0.83
AC007349.3-201ENST00000415356 LDHDQ86WU2 507 aa9.88□□□□□ -0.83
AC007349.3-201ENST00000415356 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
AC007349.3-201ENST00000415356 RNF123Q5XPI4 1314 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 STARD3NLO95772 234 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 ZNF790Q6PG37 636 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 CNBD1Q8NA66 436 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 ABHD8Q96I13 439 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 USP16Q9Y5T5 823 aa9.87□□□□□ -0.83
AC007349.3-201ENST00000415356 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 FAM177BA6PVY3 158 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 STYK1Q6J9G0 422 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 MASTLQ96GX5 879 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 TRPM7Q96QT4 1865 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
AC007349.3-201ENST00000415356 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 A0A087WZG4 1122 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 KCNA4P22459 653 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 EPHX2P34913 555 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 AIDAQ96BJ3 306 aa9.85□□□□□ -0.83
AC007349.3-201ENST00000415356 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 RASSF10A6NK89 507 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 EIF4G2P78344 907 aaKnown RBP eCLIP9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 DEFB115Q30KQ5 88 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 CCDC93Q567U6 631 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 CC2D1BQ5T0F9 858 aaKnown RBP9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 PHACTR3Q96KR7 559 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 HACL1Q9UJ83 578 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 THSD7BQ9C0I4 1608 aa9.84□□□□□ -0.83
AC007349.3-201ENST00000415356 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 TRAF5O00463 557 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 NPHP1O15259 732 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 ST5P78524 1137 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 GRM1Q13255 1194 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 HLFQ16534 295 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 CYP4F22Q6NT55 531 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 NBPF5PQ86XG9 351 aaPredicted RBP9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 SYNE4Q8N205 404 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 PDZRN3Q9UPQ7 1066 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 NUP98P52948 1817 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 ABCC12Q96J65 1359 aa9.83□□□□□ -0.84
AC007349.3-201ENST00000415356 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
AC007349.3-201ENST00000415356 CCDC85CA6NKD9 419 aa9.82□□□□□ -0.84
AC007349.3-201ENST00000415356 FZD9O00144 591 aa9.82□□□□□ -0.84
AC007349.3-201ENST00000415356 AOC2O75106 756 aa9.82□□□□□ -0.84
AC007349.3-201ENST00000415356 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms