RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 STYK1Q6J9G0 422 aa21.82■■□□□ 1.08
CPNE1-208ENST00000414711 SCN7AQ01118 1682 aa21.82■■□□□ 1.08
CPNE1-208ENST00000414711 TBC1D9BQ66K14 1250 aa21.81■■□□□ 1.08
CPNE1-208ENST00000414711 CA12O43570 354 aa21.79■■□□□ 1.08
CPNE1-208ENST00000414711 CDCA8Q53HL2 280 aa21.79■■□□□ 1.08
CPNE1-208ENST00000414711 CCDC93Q567U6 631 aa21.79■■□□□ 1.08
CPNE1-208ENST00000414711 MRC1P22897 1456 aa21.78■■□□□ 1.08
CPNE1-208ENST00000414711 SRGNP10124 158 aa21.78■■□□□ 1.08
CPNE1-208ENST00000414711 CANXP27824 592 aaKnown RBP21.78■■□□□ 1.08
CPNE1-208ENST00000414711 DGKZQ13574 1117 aa21.78■■□□□ 1.08
CPNE1-208ENST00000414711 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
CPNE1-208ENST00000414711 SLC52A2Q9HAB3 445 aa21.78■■□□□ 1.08
CPNE1-208ENST00000414711 ZNF277Q9NRM2 450 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-208ENST00000414711 MAP2K2P36507 400 aa21.77■■□□□ 1.08
CPNE1-208ENST00000414711 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-208ENST00000414711 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
CPNE1-208ENST00000414711 CNBD1Q8NA66 436 aa21.77■■□□□ 1.08
CPNE1-208ENST00000414711 MASTLQ96GX5 879 aa21.77■■□□□ 1.08
CPNE1-208ENST00000414711 A0A087WZG4 1122 aa21.76■■□□□ 1.07
CPNE1-208ENST00000414711 NPHP1O15259 732 aa21.76■■□□□ 1.07
CPNE1-208ENST00000414711 AOC2O75106 756 aa21.76■■□□□ 1.07
CPNE1-208ENST00000414711 FKBP4Q02790 459 aaKnown RBP eCLIP21.76■■□□□ 1.07
CPNE1-208ENST00000414711 FMR1Q06787 632 aaKnown RBP eCLIP21.76■■□□□ 1.077e-7■■■□□ 18.6
CPNE1-208ENST00000414711 PRPF38BQ5VTL8 546 aaKnown RBP21.76■■□□□ 1.07
CPNE1-208ENST00000414711 CASP8AP2Q9UKL3 1982 aa21.76■■□□□ 1.07
CPNE1-208ENST00000414711 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
CPNE1-208ENST00000414711 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
CPNE1-208ENST00000414711 ST5P78524 1137 aa21.74■■□□□ 1.07
CPNE1-208ENST00000414711 GPC2Q8N158 579 aa21.74■■□□□ 1.07
CPNE1-208ENST00000414711 TLL2Q9Y6L7 1015 aa21.74■■□□□ 1.07
CPNE1-208ENST00000414711 VSIG10Q8N0Z9 540 aa21.73■■□□□ 1.07
CPNE1-208ENST00000414711 FZD9O00144 591 aa21.72■■□□□ 1.07
CPNE1-208ENST00000414711 CST9Q5W186 159 aa21.72■■□□□ 1.07
CPNE1-208ENST00000414711 TRPM7Q96QT4 1865 aa21.72■■□□□ 1.07
CPNE1-208ENST00000414711 SOX10P56693 466 aa21.71■■□□□ 1.07
CPNE1-208ENST00000414711 TRAF5O00463 557 aa21.7■■□□□ 1.06
CPNE1-208ENST00000414711 BRPF1P55201 1214 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-208ENST00000414711 AKAP4Q5JQC9 854 aa21.7■■□□□ 1.06
CPNE1-208ENST00000414711 SETDB2Q96T68 719 aa21.7■■□□□ 1.06
CPNE1-208ENST00000414711 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
CPNE1-208ENST00000414711 STARD3NLO95772 234 aa21.69■■□□□ 1.06
CPNE1-208ENST00000414711 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-208ENST00000414711 IARSP41252 1262 aaKnown RBP21.69■■□□□ 1.06
CPNE1-208ENST00000414711 LGR6Q9HBX8 967 aa21.69■■□□□ 1.06
CPNE1-208ENST00000414711 TBC1D2BQ9UPU7 963 aa21.69■■□□□ 1.06
CPNE1-208ENST00000414711 SULT6B1Q6IMI4 303 aa21.68■■□□□ 1.06
CPNE1-208ENST00000414711 OLFM4Q6UX06 510 aa21.68■■□□□ 1.06
CPNE1-208ENST00000414711 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
CPNE1-208ENST00000414711 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-208ENST00000414711 BCORQ6W2J9 1755 aa21.68■■□□□ 1.06
CPNE1-208ENST00000414711 NPR1P16066 1061 aa21.66■■□□□ 1.06
CPNE1-208ENST00000414711 SAPCD2Q86UD0 394 aa21.66■■□□□ 1.06
CPNE1-208ENST00000414711 GJA3Q9Y6H8 435 aa21.66■■□□□ 1.06
CPNE1-208ENST00000414711 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
CPNE1-208ENST00000414711 CIAPIN1Q6FI81 312 aa21.64■■□□□ 1.05
CPNE1-208ENST00000414711 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
CPNE1-208ENST00000414711 CAMTA2O94983 1202 aa21.63■■□□□ 1.05
CPNE1-208ENST00000414711 EPS15P42566 896 aa21.63■■□□□ 1.05
CPNE1-208ENST00000414711 SCNN1DP51172 638 aa21.63■■□□□ 1.05
CPNE1-208ENST00000414711 EIF6P56537 245 aaKnown RBP21.63■■□□□ 1.05
CPNE1-208ENST00000414711 SYNE4Q8N205 404 aa21.63■■□□□ 1.05
CPNE1-208ENST00000414711 USP50Q70EL3 339 aaPredicted RBP21.62■■□□□ 1.05
CPNE1-208ENST00000414711 HHIPL1Q96JK4 782 aa21.62■■□□□ 1.05
CPNE1-208ENST00000414711 COL4A5P29400 1685 aa21.62■■□□□ 1.05
CPNE1-208ENST00000414711 CELF2O95319 508 aaKnown RBP21.61■■□□□ 1.05
CPNE1-208ENST00000414711 IL6STP40189 918 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-208ENST00000414711 NBPF5PQ86XG9 351 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-208ENST00000414711 TTC5Q8N0Z6 440 aa21.61■■□□□ 1.05
CPNE1-208ENST00000414711 SNED1Q8TER0 1413 aa21.6■■□□□ 1.05
CPNE1-208ENST00000414711 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
CPNE1-208ENST00000414711 PSMD1Q99460 953 aa21.59■■□□□ 1.05
CPNE1-208ENST00000414711 KLRG2A4D1S0 409 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-208ENST00000414711 NOGQ13253 232 aa21.57■■□□□ 1.04
CPNE1-208ENST00000414711 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
CPNE1-208ENST00000414711 ZNF496Q96IT1 587 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-208ENST00000414711 TEX13AQ9BXU3 409 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-208ENST00000414711 DZIP3Q86Y13 1208 aaKnown RBP21.55■■□□□ 1.04
CPNE1-208ENST00000414711 IL13P35225 146 aa21.54■■□□□ 1.04
CPNE1-208ENST00000414711 ZIC5Q96T25 663 aa21.54■■□□□ 1.04
CPNE1-208ENST00000414711 ZNF408Q9H9D4 720 aa21.54■■□□□ 1.04
CPNE1-208ENST00000414711 A1BGP04217 495 aa21.53■■□□□ 1.04
CPNE1-208ENST00000414711 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
CPNE1-208ENST00000414711 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
CPNE1-208ENST00000414711 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-208ENST00000414711 ADARB2Q9NS39 739 aaKnown RBP21.53■■□□□ 1.04
CPNE1-208ENST00000414711 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
CPNE1-208ENST00000414711 SAGE1Q9NXZ1 904 aa21.52■■□□□ 1.04
CPNE1-208ENST00000414711 GPRC5DQ9NZD1 345 aa21.51■■□□□ 1.03
CPNE1-208ENST00000414711 MTHFSDQ2M296 383 aaKnown RBP21.5■■□□□ 1.03
CPNE1-208ENST00000414711 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
CPNE1-208ENST00000414711 CLEC4GQ6UXB4 293 aa21.5■■□□□ 1.03
CPNE1-208ENST00000414711 TPTE2Q6XPS3 522 aa21.5■■□□□ 1.03
CPNE1-208ENST00000414711 NBPF15Q8N660 670 aa21.5■■□□□ 1.03
CPNE1-208ENST00000414711 ZNF652Q9Y2D9 606 aa21.5■■□□□ 1.03
CPNE1-208ENST00000414711 CC2D2BQ6DHV5 1058 aa21.49■■□□□ 1.03
CPNE1-208ENST00000414711 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
CPNE1-208ENST00000414711 HMOX1P09601 288 aa21.47■■□□□ 1.03
CPNE1-208ENST00000414711 HUNKP57058 714 aa21.47■■□□□ 1.03
CPNE1-208ENST00000414711 CTU1Q7Z7A3 348 aaKnown RBP21.47■■□□□ 1.03
CPNE1-208ENST00000414711 FMNL2Q96PY5 1086 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms