RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 A0A087WZG4 1122 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 C21orf2O43822 256 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 SULT6B1Q6IMI4 303 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 LDHDQ86WU2 507 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 VSIG10Q8N0Z9 540 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 BRIP1Q9BX63 1249 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 ZBTB1Q9Y2K1 713 aa8.21□□□□□ -1.1
HMGN1P20-201ENST00000411849 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
HMGN1P20-201ENST00000411849 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
HMGN1P20-201ENST00000411849 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
HMGN1P20-201ENST00000411849 THSD7BQ9C0I4 1608 aa8.2□□□□□ -1.1
HMGN1P20-201ENST00000411849 PASKQ96RG2 1323 aa8.2□□□□□ -1.1
HMGN1P20-201ENST00000411849 NPHP1O15259 732 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 DDNO94850 711 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 STARD3NLO95772 234 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 VEGFBP49765 207 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 LBX1P52954 281 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 L3MBTL3Q96JM7 780 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 WBP1LQ9NX94 342 aa8.19□□□□□ -1.1
HMGN1P20-201ENST00000411849 RNMTO43148 476 aaKnown RBP8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 SLC39A6Q13433 755 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 STYK1Q6J9G0 422 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 PRR5LQ6MZQ0 368 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 MORC1Q86VD1 984 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 CNBD1Q8NA66 436 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 ABHD8Q96I13 439 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 TAF1DQ9H5J8 278 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 LGR6Q9HBX8 967 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 PCDH10Q9P2E7 1040 aa8.18□□□□□ -1.1
HMGN1P20-201ENST00000411849 ITGBL1O95965 494 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 ST5P78524 1137 aa8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 DEFB115Q30KQ5 88 aa8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 FAM161AQ3B820 660 aa8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 EAPPQ56P03 285 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 TBC1D9BQ66K14 1250 aa8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 PNMA8AQ86V59 439 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 TEX13AQ9BXU3 409 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P20-201ENST00000411849 RASSF10A6NK89 507 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 SRGNP10124 158 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 HSPA8P11142 646 aaKnown RBP8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 IL13P35225 146 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 MLLT1Q03111 559 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 MASTLQ96GX5 879 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 HACL1Q9UJ83 578 aa8.16□□□□□ -1.1
HMGN1P20-201ENST00000411849 WDR33Q9C0J8 1336 aaKnown RBP8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 EPHX2P34913 555 aa8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 CCDC93Q567U6 631 aa8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 PANK3Q9H999 370 aa8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 ZNF330Q9Y3S2 320 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P20-201ENST00000411849 CASP8AP2Q9UKL3 1982 aa8.15□□□□□ -1.11
HMGN1P20-201ENST00000411849 HEG1Q9ULI3 1381 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 CCDC85CA6NKD9 419 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 CNTROBQ8N137 903 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 CCDC24Q8N4L8 307 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 TIMELESSQ9UNS1 1208 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 NUP98P52948 1817 aa8.14□□□□□ -1.11
HMGN1P20-201ENST00000411849 ZNF541Q9H0D2 1346 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 LTBP1Q14766 1721 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 HMOX1P09601 288 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 NPR1P16066 1061 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 ECE1P42892 770 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 RGS19P49795 217 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 TEFQ10587 303 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 MAP1SQ66K74 1059 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 ZNF790Q6PG37 636 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 NBPF5PQ86XG9 351 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 GPC2Q8N158 579 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 ZNF496Q96IT1 587 aaPredicted RBP8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
HMGN1P20-201ENST00000411849 LAMB4A4D0S4 1761 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 RNF123Q5XPI4 1314 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 CAMTA2O94983 1202 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 ZNF277Q9NRM2 450 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 549.4 ms