RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
CLK1-203ENST00000409769 C1orf53Q5VUE5 145 aa8.97□□□□□ -0.97
CLK1-203ENST00000409769 FCHSD1Q86WN1 690 aa8.97□□□□□ -0.97
CLK1-203ENST00000409769 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
CLK1-203ENST00000409769 ADAM23O75077 832 aa8.96□□□□□ -0.98
CLK1-203ENST00000409769 ALAS2P22557 587 aa8.96□□□□□ -0.98
CLK1-203ENST00000409769 TNS4Q8IZW8 715 aa8.96□□□□□ -0.98
CLK1-203ENST00000409769 ANKIB1Q9P2G1 1089 aa8.96□□□□□ -0.98
CLK1-203ENST00000409769 KLF15Q9UIH9 416 aa8.96□□□□□ -0.98
CLK1-203ENST00000409769 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
CLK1-203ENST00000409769 ELOA3DA6NLF2 546 aaPredicted RBP8.95□□□□□ -0.98
CLK1-203ENST00000409769 POM121CA8CG34 1229 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
CLK1-203ENST00000409769 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 ELOA3BQ3SY89 546 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 SIX5Q8N196 739 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 ELOA3Q8NG57 546 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 ADAMTS19Q8TE59 1207 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 HCN2Q9UL51 889 aa8.95□□□□□ -0.98
CLK1-203ENST00000409769 CLDN10P78369 228 aa8.94□□□□□ -0.98
CLK1-203ENST00000409769 LRRC69Q6ZNQ3 347 aa8.94□□□□□ -0.98
CLK1-203ENST00000409769 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
CLK1-203ENST00000409769 UCN2Q96RP3 112 aa8.94□□□□□ -0.98
CLK1-203ENST00000409769 SUV39H2Q9H5I1 410 aa8.94□□□□□ -0.98
CLK1-203ENST00000409769 MKRN1Q9UHC7 482 aaKnown RBP8.94□□□□□ -0.98
CLK1-203ENST00000409769 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 SIN3BO75182 1162 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 BAG6P46379 1132 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 PCBP4P57723 403 aaKnown RBP8.93□□□□□ -0.98
CLK1-203ENST00000409769 HIF1AQ16665 826 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 STRN4Q9NRL3 753 aa8.93□□□□□ -0.98
CLK1-203ENST00000409769 A6NJR5 290 aa8.92□□□□□ -0.98
CLK1-203ENST00000409769 SYT9Q86SS6 491 aa8.92□□□□□ -0.98
CLK1-203ENST00000409769 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
CLK1-203ENST00000409769 KIAA1024Q9UPX6 916 aa8.92□□□□□ -0.98
CLK1-203ENST00000409769 ADARB2-AS1A8MUL3 147 aa8.91□□□□□ -0.98
CLK1-203ENST00000409769 K7ELQ4 463 aaPredicted RBP8.91□□□□□ -0.98
CLK1-203ENST00000409769 STAG2Q8N3U4 1231 aa8.91□□□□□ -0.98
CLK1-203ENST00000409769 TNFRSF25Q93038 417 aa8.91□□□□□ -0.98
CLK1-203ENST00000409769 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
CLK1-203ENST00000409769 KCNQ4P56696 695 aa8.9□□□□□ -0.98
CLK1-203ENST00000409769 TBCELQ5QJ74 424 aa8.9□□□□□ -0.98
CLK1-203ENST00000409769 SPATA31C1P0DKV0 1188 aa8.89□□□□□ -0.99
CLK1-203ENST00000409769 MDFIQ99750 246 aa8.89□□□□□ -0.99
CLK1-203ENST00000409769 PHACTR1Q9C0D0 580 aa8.89□□□□□ -0.99
CLK1-203ENST00000409769 EFCC1Q9HA90 598 aa8.89□□□□□ -0.99
CLK1-203ENST00000409769 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
CLK1-203ENST00000409769 PROSER2Q86WR7 435 aaPredicted RBP8.88□□□□□ -0.99
CLK1-203ENST00000409769 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
CLK1-203ENST00000409769 BRD7Q9NPI1 651 aa8.88□□□□□ -0.99
CLK1-203ENST00000409769 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
CLK1-203ENST00000409769 SEC13P55735 322 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 SPEM2Q0P670 501 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 CD163Q86VB7 1156 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 GLMNQ92990 594 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 CEP63Q96MT8 703 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 PLVAPQ9BX97 442 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 PRDM6Q9NQX0 595 aa8.87□□□□□ -0.99
CLK1-203ENST00000409769 RASA1P20936 1047 aa8.86□□□□□ -0.99
CLK1-203ENST00000409769 SFSWAPQ12872 951 aaKnown RBP8.86□□□□□ -0.99
CLK1-203ENST00000409769 PRRT3Q5FWE3 981 aa8.86□□□□□ -0.99
CLK1-203ENST00000409769 TSEN2Q8NCE0 465 aaKnown RBP8.86□□□□□ -0.99
CLK1-203ENST00000409769 TRIM11Q96F44 468 aa8.86□□□□□ -0.99
CLK1-203ENST00000409769 ZNF594Q96JF6 807 aaPredicted RBP8.86□□□□□ -0.99
CLK1-203ENST00000409769 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
CLK1-203ENST00000409769 HCN4Q9Y3Q4 1203 aa8.86□□□□□ -0.99
CLK1-203ENST00000409769 MAFBQ9Y5Q3 323 aaPredicted RBP8.86□□□□□ -0.99
CLK1-203ENST00000409769 DKK1O94907 266 aa8.85□□□□□ -0.99
CLK1-203ENST00000409769 TYRO3Q06418 890 aa8.85□□□□□ -0.99
CLK1-203ENST00000409769 LARP1Q6PKG0 1096 aaKnown RBP8.85□□□□□ -0.99
CLK1-203ENST00000409769 SUSD3Q96L08 255 aa8.85□□□□□ -0.99
CLK1-203ENST00000409769 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
CLK1-203ENST00000409769 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
CLK1-203ENST00000409769 CHRNA4P43681 627 aa8.84□□□□□ -0.99
CLK1-203ENST00000409769 ALDH16A1Q8IZ83 802 aa8.84□□□□□ -0.99
CLK1-203ENST00000409769 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
CLK1-203ENST00000409769 SLC30A3Q99726 388 aa8.84□□□□□ -0.99
CLK1-203ENST00000409769 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
CLK1-203ENST00000409769 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
CLK1-203ENST00000409769 C21orf2O43822 256 aa8.83□□□□□ -1
CLK1-203ENST00000409769 IER5Q5VY09 327 aa8.83□□□□□ -1
CLK1-203ENST00000409769 HSH2DQ96JZ2 352 aa8.83□□□□□ -1
CLK1-203ENST00000409769 M0R082 166 aa8.82□□□□□ -1
CLK1-203ENST00000409769 ADH7P40394 386 aa8.82□□□□□ -1
CLK1-203ENST00000409769 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
CLK1-203ENST00000409769 NACC1Q96RE7 527 aa8.82□□□□□ -1
CLK1-203ENST00000409769 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
CLK1-203ENST00000409769 ZMYND15Q9H091 742 aa8.82□□□□□ -1
CLK1-203ENST00000409769 APBA3O96018 575 aa8.81□□□□□ -1
CLK1-203ENST00000409769 FURINP09958 794 aa8.81□□□□□ -1
CLK1-203ENST00000409769 GATA4P43694 442 aa8.81□□□□□ -1
CLK1-203ENST00000409769 BTLAQ7Z6A9 289 aa8.81□□□□□ -1
CLK1-203ENST00000409769 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
CLK1-203ENST00000409769 CALR3Q96L12 384 aaKnown RBP8.81□□□□□ -1
CLK1-203ENST00000409769 FAM196BA6NMK8 535 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms