RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 KIF20AO95235 890 aa18.56■□□□□ 0.56
LIMS2-205ENST00000409455 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
LIMS2-205ENST00000409455 TMEM87AQ8NBN3 555 aa18.56■□□□□ 0.56
LIMS2-205ENST00000409455 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
LIMS2-205ENST00000409455 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
LIMS2-205ENST00000409455 PLEKHO1Q53GL0 409 aaPredicted RBP18.55■□□□□ 0.56
LIMS2-205ENST00000409455 MX1P20591 662 aa18.55■□□□□ 0.56
LIMS2-205ENST00000409455 PDCL2Q8N4E4 241 aa18.55■□□□□ 0.56
LIMS2-205ENST00000409455 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
LIMS2-205ENST00000409455 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
LIMS2-205ENST00000409455 NCAPD2Q15021 1401 aa18.54■□□□□ 0.56
LIMS2-205ENST00000409455 KDM4AO75164 1064 aa18.54■□□□□ 0.56
LIMS2-205ENST00000409455 ATP2B3Q16720 1220 aa18.54■□□□□ 0.56
LIMS2-205ENST00000409455 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
LIMS2-205ENST00000409455 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
LIMS2-205ENST00000409455 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-205ENST00000409455 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
LIMS2-205ENST00000409455 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-205ENST00000409455 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
LIMS2-205ENST00000409455 RGPD5Q99666 1765 aa18.52■□□□□ 0.56
LIMS2-205ENST00000409455 TPM3P06753 285 aa18.52■□□□□ 0.56
LIMS2-205ENST00000409455 PLCB2Q00722 1185 aa18.52■□□□□ 0.56
LIMS2-205ENST00000409455 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
LIMS2-205ENST00000409455 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.55
LIMS2-205ENST00000409455 UBE2HP62256 183 aa18.52■□□□□ 0.55
LIMS2-205ENST00000409455 CPDO75976 1380 aa18.51■□□□□ 0.55
LIMS2-205ENST00000409455 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
LIMS2-205ENST00000409455 TSHZ3Q63HK5 1081 aa18.51■□□□□ 0.55
LIMS2-205ENST00000409455 A0A0U1RQG5 324 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-205ENST00000409455 TRIM6-TRIM34B2RNG4 842 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 CHMLP26374 656 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 KIAA1524Q8TCG1 905 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 IL17RAQ96F46 866 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
LIMS2-205ENST00000409455 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-205ENST00000409455 GOLGA6L6A8MZA4 724 aa18.49■□□□□ 0.55
LIMS2-205ENST00000409455 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
LIMS2-205ENST00000409455 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
LIMS2-205ENST00000409455 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
LIMS2-205ENST00000409455 LRRCC1Q9C099 1032 aa18.49■□□□□ 0.55
LIMS2-205ENST00000409455 TCHHQ07283 1943 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 COL18A1P39060 1754 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 RIOK3O14730 519 aaKnown RBP18.48■□□□□ 0.55
LIMS2-205ENST00000409455 TPRNQ4KMQ1 711 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 ATP6V1DQ9Y5K8 247 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 SALL3Q9BXA9 1300 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 SPDYE4A6NLX3 237 aa18.48■□□□□ 0.55
LIMS2-205ENST00000409455 ZSCAN22P10073 491 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-205ENST00000409455 ANKRD7Q92527 254 aa18.47■□□□□ 0.55
LIMS2-205ENST00000409455 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
LIMS2-205ENST00000409455 CRYBG1Q9Y4K1 1723 aa18.47■□□□□ 0.55
LIMS2-205ENST00000409455 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
LIMS2-205ENST00000409455 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
LIMS2-205ENST00000409455 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
LIMS2-205ENST00000409455 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
LIMS2-205ENST00000409455 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
LIMS2-205ENST00000409455 GNAI2P04899 355 aa18.46■□□□□ 0.55
LIMS2-205ENST00000409455 KCNF1Q9H3M0 494 aa18.46■□□□□ 0.55
LIMS2-205ENST00000409455 PYCARDQ9ULZ3 195 aa18.46■□□□□ 0.55
LIMS2-205ENST00000409455 CAMTA1Q9Y6Y1 1673 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
LIMS2-205ENST00000409455 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
LIMS2-205ENST00000409455 FIBPO43427 364 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 TEFQ10587 303 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 STX6O43752 255 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 TATP17735 454 aaPredicted RBP18.45■□□□□ 0.54
LIMS2-205ENST00000409455 U2AF2P26368 475 aaKnown RBP eCLIP18.45■□□□□ 0.54
LIMS2-205ENST00000409455 FEZ1Q99689 392 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 FUCA2Q9BTY2 467 aa18.45■□□□□ 0.54
LIMS2-205ENST00000409455 GIMAP6Q6P9H5 292 aa18.44■□□□□ 0.54
LIMS2-205ENST00000409455 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
LIMS2-205ENST00000409455 HSPA4P34932 840 aa18.44■□□□□ 0.54
LIMS2-205ENST00000409455 LMO7Q8WWI1 1683 aa18.43■□□□□ 0.54
LIMS2-205ENST00000409455 SPC24Q8NBT2 197 aa18.43■□□□□ 0.54
LIMS2-205ENST00000409455 KCNQ3O43525 872 aa18.43■□□□□ 0.54
LIMS2-205ENST00000409455 F13A1P00488 732 aa18.43■□□□□ 0.54
LIMS2-205ENST00000409455 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
LIMS2-205ENST00000409455 BTBD11A6QL63 1104 aa18.42■□□□□ 0.54
LIMS2-205ENST00000409455 SYT1P21579 422 aa18.42■□□□□ 0.54
LIMS2-205ENST00000409455 G2E3Q7L622 706 aa18.42■□□□□ 0.54
LIMS2-205ENST00000409455 MEGF6O75095 1541 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 ABCC6O95255 1503 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 F6X3S4 739 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 CCDC192P0DO97 292 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 STAP2Q9UGK3 403 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 AP5Z1O43299 807 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
LIMS2-205ENST00000409455 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
LIMS2-205ENST00000409455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
LIMS2-205ENST00000409455 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
LIMS2-205ENST00000409455 WDR17Q8IZU2 1322 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms