RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 IGFBP4P22692 258 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 SERPINB4P48594 390 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 Q6ZNB5 142 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 TNS4Q8IZW8 715 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 RAB6BQ9NRW1 208 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 MYO3AQ8NEV4 1616 aa7.74□□□□□ -1.17
CLK1-202ENST00000409403 TCOF1Q13428 1488 aaKnown RBP7.74□□□□□ -1.17
CLK1-202ENST00000409403 J3QL48 77 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 EPHA4P54764 986 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 CCDC27Q2M243 656 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 KLF16Q9BXK1 252 aaPredicted RBP7.73□□□□□ -1.17
CLK1-202ENST00000409403 STRCP1A6NGW2 1772 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 GFRA3O60609 400 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
CLK1-202ENST00000409403 CBLBQ13191 982 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
CLK1-202ENST00000409403 LAPTM4AQ15012 233 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 SCG3Q8WXD2 468 aaKnown RBP7.73□□□□□ -1.17
CLK1-202ENST00000409403 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
CLK1-202ENST00000409403 FHOD3Q2V2M9 1422 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 FOXO3O43524 673 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
CLK1-202ENST00000409403 Q6ZVU0 165 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 GAS2L2Q8NHY3 880 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 XAGE2Q96GT9 111 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
CLK1-202ENST00000409403 SHANK2Q9UPX8 1470 aa7.72□□□□□ -1.17
CLK1-202ENST00000409403 PLA2R1Q13018 1463 aa7.71□□□□□ -1.17
CLK1-202ENST00000409403 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 A6NJY4 79 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PTCD1O75127 700 aaKnown RBP7.71□□□□□ -1.18
CLK1-202ENST00000409403 IL2RAP01589 272 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 SMTNP53814 917 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PRR20EP86478 221 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PRR20CP86479 221 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PRR20DP86480 221 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PRR20BP86481 221 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 PRR20AP86496 221 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 MTFR1Q15390 333 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 KDF1Q8NAX2 398 aaPredicted RBP7.71□□□□□ -1.18
CLK1-202ENST00000409403 CNKSR1Q969H4 720 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 ESYT1Q9BSJ8 1104 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
CLK1-202ENST00000409403 ABCA8O94911 1581 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 VWDEQ8N2E2 1590 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.18
CLK1-202ENST00000409403 TIMP2P16035 220 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 SMPD1P17405 629 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 CLN3Q13286 438 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 COL26A1Q96A83 441 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 PURBQ96QR8 312 aaKnown RBP7.7□□□□□ -1.18
CLK1-202ENST00000409403 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 TRAPPC8Q9Y2L5 1435 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 NEURL4Q96JN8 1562 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 C21orf2O43822 256 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 ABL1P00519 1130 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 PTGIRP43119 386 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 FOXK2Q01167 660 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 TLR1Q15399 786 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 TRIM67Q6ZTA4 783 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 RGS22Q8NE09 1264 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 SEPT3Q9UH03 358 aa7.7□□□□□ -1.18
CLK1-202ENST00000409403 SUPT16HQ9Y5B9 1047 aaKnown RBP7.7□□□□□ -1.18
CLK1-202ENST00000409403 RAPGEF2Q9Y4G8 1499 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 CFAP74Q9C0B2 1584 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 SENP3-EIF4A1A0A087X0R7 540 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
CLK1-202ENST00000409403 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
CLK1-202ENST00000409403 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
CLK1-202ENST00000409403 CEP170BQ9Y4F5 1589 aaPredicted RBP7.68□□□□□ -1.18
CLK1-202ENST00000409403 RELBQ01201 579 aa7.68□□□□□ -1.18
CLK1-202ENST00000409403 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
CLK1-202ENST00000409403 GTF3C2Q8WUA4 911 aaPredicted RBP7.68□□□□□ -1.18
CLK1-202ENST00000409403 AGBL1Q96MI9 1066 aa7.68□□□□□ -1.18
CLK1-202ENST00000409403 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
CLK1-202ENST00000409403 XIRP1Q702N8 1843 aaKnown RBP7.67□□□□□ -1.18
CLK1-202ENST00000409403 MEN1O00255 615 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 NRG2O14511 850 aaPredicted RBP7.67□□□□□ -1.18
CLK1-202ENST00000409403 CDK2AP1O14519 115 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 PSMA6P60900 246 aaKnown RBP7.67□□□□□ -1.18
CLK1-202ENST00000409403 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.67□□□□□ -1.182e-7■■■■■ 64.8
CLK1-202ENST00000409403 SYNMO15061 1565 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 MAGI2Q86UL8 1455 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 YY1P25490 414 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 ZNF211Q13398 564 aaPredicted RBP7.67□□□□□ -1.18
CLK1-202ENST00000409403 MEIOBQ8N635 442 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
CLK1-202ENST00000409403 IQSEC3Q9UPP2 1182 aaPredicted RBP7.67□□□□□ -1.18
CLK1-202ENST00000409403 ATP10AO60312 1499 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 H3BRB1 525 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms