RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 BEND3Q5T5X7 828 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 KSR2Q6VAB6 950 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 PCDH11XQ9BZA7 1347 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 PCDH11YQ9BZA8 1340 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 CAMTA1Q9Y6Y1 1673 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 SPDYE4A6NLX3 237 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 SLC39A6Q13433 755 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 ANP32EQ9BTT0 268 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 LMO7Q8WWI1 1683 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 COL18A1P39060 1754 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 PLEKHM2Q8IWE5 1019 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 PXDNLA1KZ92 1463 aa7.78□□□□□ -1.16
GTF3C3-202ENST00000409364 MEGF6O75095 1541 aa7.77□□□□□ -1.16
GTF3C3-202ENST00000409364 KDM6AO15550 1401 aaPredicted RBP7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 ATP10DQ9P241 1426 aa7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 PDIA6Q15084 440 aa7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 LINS1Q8NG48 757 aa7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 ZNF496Q96IT1 587 aaPredicted RBP7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 MAP3K2Q9Y2U5 619 aa7.77□□□□□ -1.17
GTF3C3-202ENST00000409364 RAB11FIP3O75154 756 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 ANXA1P04083 346 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 HSP90AB4PQ58FF6 505 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 DDX54Q8TDD1 881 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 SSH3Q8TE77 659 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 TBC1D32Q96NH3 1257 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 BTG4Q9NY30 223 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 C9orf78Q9NZ63 289 aaPredicted RBP7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 LRRFIP2Q9Y608 721 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 RGPD2P0DJD1 1756 aa7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 COL5A2P05997 1499 aaPredicted RBP7.76□□□□□ -1.17
GTF3C3-202ENST00000409364 PRAMEF22A3QJZ6 481 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 NEXNQ0ZGT2 675 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 BECN1Q14457 450 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 PROSER3Q2NL68 480 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 RIC3Q7Z5B4 369 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 LRRCC1Q9C099 1032 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 USP16Q9Y5T5 823 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 PNMA6EA0A0J9YXQ4 647 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 TOM1O60784 492 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 NBPF7P0C2Y1 421 aaPredicted RBP7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 AIMP1Q12904 312 aaKnown RBP7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 TTC22Q5TAA0 569 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 COPS6Q7L5N1 327 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 C16orf71Q8IYS4 520 aaPredicted RBP7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 C22orf23Q9BZE7 217 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
GTF3C3-202ENST00000409364 ADCY9O60503 1353 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 IBTKQ9P2D0 1353 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 CACNA1FO60840 1977 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 APBB1O00213 710 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 CDC45O75419 566 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 MTX1Q13505 466 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 PPP1R42Q7Z4L9 355 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 PDCD7Q8N8D1 485 aaKnown RBP7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 CERKQ8TCT0 537 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 XAGE3Q8WTP9 111 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 TEX13AQ9BXU3 409 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 EXOC6BQ9Y2D4 811 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 FAM208AQ9UK61 1670 aaKnown RBP7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 ADAMTS7Q9UKP4 1686 aa7.74□□□□□ -1.17
GTF3C3-202ENST00000409364 GRM8O00222 908 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 EXOC5O00471 708 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 SRGAP3O43295 1099 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 SMARCA5O60264 1052 aaPredicted RBP7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 SURF6O75683 361 aaKnown RBP7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 MYL6BP14649 208 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 MFAP1P55081 439 aaKnown RBP7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 CASC1Q6TDU7 716 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 CDCA7Q9BWT1 371 aaPredicted RBP7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 UTYO14607 1347 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 KDM3BQ7LBC6 1761 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 RGPD5Q99666 1765 aa7.73□□□□□ -1.17
GTF3C3-202ENST00000409364 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 MRC1P22897 1456 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 RBM25P49756 843 aaKnown RBP7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 PDE1AP54750 535 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 TBC1D9Q6ZT07 1266 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 LRP10Q7Z4F1 713 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 KIF1BPQ96EK5 621 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 TMOD3Q9NYL9 352 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 STAP2Q9UGK3 403 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 GSPT1P15170 499 aaKnown RBP7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 CWF19L2Q2TBE0 894 aaKnown RBP7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 PLBD2Q8NHP8 589 aa7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 THRAP3Q9Y2W1 955 aaKnown RBP7.72□□□□□ -1.17
GTF3C3-202ENST00000409364 NHSL1Q5SYE7 1610 aa7.71□□□□□ -1.17
GTF3C3-202ENST00000409364 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 UBAP1LF5GYI3 381 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 IGKV5-2P06315 115 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 SDSP20132 328 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 MX1P20591 662 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 GCKRQ14397 625 aa7.71□□□□□ -1.18
GTF3C3-202ENST00000409364 ERC1Q8IUD2 1116 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms