RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
SDF4-203ENST00000403997 ST5P78524 1137 aa17.43■□□□□ 0.38
SDF4-203ENST00000403997 NBPF5PQ86XG9 351 aaPredicted RBP17.43■□□□□ 0.38
SDF4-203ENST00000403997 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
SDF4-203ENST00000403997 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
SDF4-203ENST00000403997 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
SDF4-203ENST00000403997 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
SDF4-203ENST00000403997 KDM3BQ7LBC6 1761 aa17.43■□□□□ 0.38
SDF4-203ENST00000403997 RGL2O15211 777 aa17.42■□□□□ 0.38
SDF4-203ENST00000403997 HLFQ16534 295 aa17.42■□□□□ 0.38
SDF4-203ENST00000403997 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
SDF4-203ENST00000403997 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
SDF4-203ENST00000403997 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
SDF4-203ENST00000403997 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
SDF4-203ENST00000403997 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
SDF4-203ENST00000403997 CHL1O00533 1208 aa17.4■□□□□ 0.38
SDF4-203ENST00000403997 TTLL7Q6ZT98 887 aa17.4■□□□□ 0.38
SDF4-203ENST00000403997 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
SDF4-203ENST00000403997 APAF1O14727 1248 aa17.39■□□□□ 0.37
SDF4-203ENST00000403997 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
SDF4-203ENST00000403997 ERBB4Q15303 1308 aa17.39■□□□□ 0.37
SDF4-203ENST00000403997 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
SDF4-203ENST00000403997 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
SDF4-203ENST00000403997 NECTIN2Q92692 538 aa17.38■□□□□ 0.37
SDF4-203ENST00000403997 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
SDF4-203ENST00000403997 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
SDF4-203ENST00000403997 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
SDF4-203ENST00000403997 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
SDF4-203ENST00000403997 SRGNP10124 158 aa17.37■□□□□ 0.37
SDF4-203ENST00000403997 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
SDF4-203ENST00000403997 C21orf2O43822 256 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 ANXA1P04083 346 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 RASSF7Q02833 373 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 PDIA6Q15084 440 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
SDF4-203ENST00000403997 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 ANP32CO43423 234 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 GPTP24298 496 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 NYXQ9GZU5 481 aa17.35■□□□□ 0.37
SDF4-203ENST00000403997 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
SDF4-203ENST00000403997 LRP10Q7Z4F1 713 aa17.34■□□□□ 0.37
SDF4-203ENST00000403997 NPR1P16066 1061 aa17.33■□□□□ 0.36
SDF4-203ENST00000403997 LMNB1P20700 586 aa17.33■□□□□ 0.36
SDF4-203ENST00000403997 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
SDF4-203ENST00000403997 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
SDF4-203ENST00000403997 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
SDF4-203ENST00000403997 KIF3CO14782 793 aa17.32■□□□□ 0.36
SDF4-203ENST00000403997 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
SDF4-203ENST00000403997 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
SDF4-203ENST00000403997 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
SDF4-203ENST00000403997 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
SDF4-203ENST00000403997 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
SDF4-203ENST00000403997 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
SDF4-203ENST00000403997 KLRG2A4D1S0 409 aaPredicted RBP17.31■□□□□ 0.36
SDF4-203ENST00000403997 NFKBIEO00221 500 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 ZNF34Q8IZ26 560 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 XAGE3Q8WTP9 111 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
SDF4-203ENST00000403997 UBN2Q6ZU65 1347 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 PRELPP51888 382 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 GNAI1P63096 354 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
SDF4-203ENST00000403997 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 NUP98P52948 1817 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 HOXB7P09629 217 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 COL11A2P13942 1736 aaPredicted RBP17.29■□□□□ 0.36
SDF4-203ENST00000403997 SBF1O95248 1867 aa17.29■□□□□ 0.36
SDF4-203ENST00000403997 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
SDF4-203ENST00000403997 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
SDF4-203ENST00000403997 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
SDF4-203ENST00000403997 NTSR2O95665 410 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 C7orf43Q8WVR3 580 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
SDF4-203ENST00000403997 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 RRAGCQ9HB90 399 aa17.27■□□□□ 0.36
SDF4-203ENST00000403997 DBF4Q9UBU7 674 aaPredicted RBP17.27■□□□□ 0.36
SDF4-203ENST00000403997 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
SDF4-203ENST00000403997 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
SDF4-203ENST00000403997 CCDC93Q567U6 631 aa17.26■□□□□ 0.35
SDF4-203ENST00000403997 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
SDF4-203ENST00000403997 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
SDF4-203ENST00000403997 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
SDF4-203ENST00000403997 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms