RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 KCPQ6ZWJ8 1503 aa7.7□□□□□ -1.18
HMGB1P20-201ENST00000402555 SSFA2P28290 1259 aa7.7□□□□□ -1.18
HMGB1P20-201ENST00000402555 CRKLP46109 303 aaKnown RBP7.7□□□□□ -1.18
HMGB1P20-201ENST00000402555 RTCBQ9Y3I0 505 aaKnown RBP7.7□□□□□ -1.18
HMGB1P20-201ENST00000402555 CNTNAP4Q9C0A0 1308 aa7.7□□□□□ -1.18
HMGB1P20-201ENST00000402555 FAM205CA6NFA0 338 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 RPS6KA4O75676 772 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 HMGB2P26583 209 aaKnown RBP7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 TEFQ10587 303 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 RC3H1Q5TC82 1133 aaKnown RBP7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 HS3ST6Q96QI5 342 aa7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 SIPA1L3O60292 1781 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P20-201ENST00000402555 KCNQ3O43525 872 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 FCHSD2O94868 740 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 RALBP1Q15311 655 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 TRAPPC3LQ5T215 181 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 INTS5Q6P9B9 1019 aaKnown RBP7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 MCM10Q7L590 875 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 TTC5Q8N0Z6 440 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 ARHGEF1Q92888 912 aaKnown RBP7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 SRP68Q9UHB9 627 aaKnown RBP7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 C4AP0C0L4 1744 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 UBR2Q8IWV8 1755 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 CEMIPQ8WUJ3 1361 aa7.68□□□□□ -1.18
HMGB1P20-201ENST00000402555 CICQ96RK0 1608 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 GOLGB1Q14789 3259 aaKnown RBP7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 UTRNP46939 3433 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 RIMBP2O15034 1052 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 MMP10P09238 476 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 RFC4P35249 363 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 CCDC87Q9NVE4 849 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 WWC3Q9ULE0 1092 aa7.67□□□□□ -1.18
HMGB1P20-201ENST00000402555 DLG5Q8TDM6 1919 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 GYS1P13807 737 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 GPR162Q16538 588 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZNF790Q6PG37 636 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 PLEKHF1Q96S99 279 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZSWIM6Q9HCJ5 1215 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZBTB1Q9Y2K1 713 aa7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 MYBBP1AQ9BQG0 1328 aaKnown RBP7.66□□□□□ -1.18
HMGB1P20-201ENST00000402555 PRAMEF22A3QJZ6 481 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 BTBD11A6QL63 1104 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 YY1P25490 414 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 CANXP27824 592 aaKnown RBP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZEB1P37275 1124 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 SOS1Q07889 1333 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 SPNS2Q8IVW8 549 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 THUMPD2Q9BTF0 503 aaKnown RBP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 USP42Q9H9J4 1324 aaKnown RBP7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 MIS18AQ9NYP9 233 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 HEG1Q9ULI3 1381 aa7.65□□□□□ -1.18
HMGB1P20-201ENST00000402555 COL15A1P39059 1388 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 MAPK8IP3Q9UPT6 1336 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 KIF3CO14782 793 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 NEFMP07197 916 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 PIP4K2AP48426 406 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 DDR1Q08345 913 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 NFE2L2Q16236 605 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 USPL1Q5W0Q7 1092 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 CCDC146Q8IYE0 955 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 VSIG10Q8N0Z9 540 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 NLGN1Q8N2Q7 840 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 FMNL2Q96PY5 1086 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 PRKRIP1Q9H875 184 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 ZNF330Q9Y3S2 320 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 CD2APQ9Y5K6 639 aa7.64□□□□□ -1.19
HMGB1P20-201ENST00000402555 HTATSF1O43719 755 aaKnown RBP7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 ZPR1O75312 459 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 STARD3NLO95772 234 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 A1BGP04217 495 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 GPR153Q6NV75 609 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 RRP7AQ9Y3A4 280 aaKnown RBP7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 USP16Q9Y5T5 823 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
HMGB1P20-201ENST00000402555 CHD4Q14839 1912 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 C10orf71Q711Q0 1435 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 N4BP2Q86UW6 1770 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 KIAA1551Q9HCM1 1747 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 A0A0G2JLW4 131 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 EIF5P55010 431 aaKnown RBP7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 MMRN1Q13201 1228 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 BCL2L12Q9HB09 334 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 NARFQ9UHQ1 456 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 PXDNLA1KZ92 1463 aa7.62□□□□□ -1.19
HMGB1P20-201ENST00000402555 POLRMTO00411 1230 aaKnown RBP7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 DPEP1P16444 411 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 TM4SF1P30408 202 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 RIPK4P57078 832 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 NFIXQ14938 502 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 NEUROD2Q15784 382 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms