RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TECPR2O15040 1411 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 ADGRL3Q9HAR2 1447 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 FLT3P36888 993 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 PSMC1P62191 440 aaKnown RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 CGNQ9P2M7 1197 aaKnown RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 CIZ1Q9ULV3 898 aaPredicted RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 BCAR3O75815 825 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 OGFOD1Q8N543 542 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 KIAA1522Q9P206 1035 aaPredicted RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 CFAP69A5D8W1 941 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 KLHL33A6NCF5 533 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 TRIM6-TRIM34B2RNG4 842 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 L1TD1Q5T7N2 865 aaKnown RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 TRIM34Q9BYJ4 488 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 NUCKS1Q9H1E3 243 aaKnown RBP7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 GABBR1Q9UBS5 961 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 BCL9LQ86UU0 1499 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 ATRNO75882 1429 aa7.92□□□□□ -1.14
TM9SF4-202ENST00000398022 KAT6BQ8WYB5 2073 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 PPP4CP60510 307 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 MORC1Q86VD1 984 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 TTC30BQ8N4P2 665 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 PNPLA6Q8IY17 1366 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 GPATCH3Q96I76 525 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 DONSONQ9NYP3 566 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 TBX22Q9Y458 520 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 GOLGB1Q14789 3259 aaKnown RBP7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 KIF3CO14782 793 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 FRAT2O75474 233 aaPredicted RBP7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 TPM3P06753 285 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
TM9SF4-202ENST00000398022 FLIIQ13045 1269 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 PHF8Q9UPP1 1060 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 A6NJR5 290 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 CASQ1P31415 396 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 MFSD4BQ5TF39 518 aa7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 RBM33Q96EV2 1170 aaKnown RBP7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 RWDD1Q9H446 243 aaPredicted RBP7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 POLR3AO14802 1390 aaPredicted RBP7.9□□□□□ -1.14
TM9SF4-202ENST00000398022 ABCD1P33897 745 aa7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 TERF1P54274 439 aa7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 C4orf46Q504U0 113 aa7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.153e-13■■■■■ 54.4
TM9SF4-202ENST00000398022 RUNDC1Q96C34 613 aa7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 CWC25Q9NXE8 425 aaPredicted RBP7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 SLAIN2Q9P270 581 aa7.9□□□□□ -1.15
TM9SF4-202ENST00000398022 PHRF1Q9P1Y6 1649 aaKnown RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 TCF3P15923 654 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 RSPH9Q9H1X1 276 aaPredicted RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 C1orf167Q5SNV9 1468 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 HDLBPQ00341 1268 aaKnown RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 BRINP3Q76B58 766 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 C1orf131Q8NDD1 294 aaKnown RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 STAG3Q9UJ98 1225 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 PEAK1Q9H792 1746 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 ESPNB1AK53 854 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 CBFA2T2O43439 604 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 POU5F1Q01860 360 aaKnown RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 LSM14AQ8ND56 463 aaKnown RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 PANK1Q8TE04 598 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 SWAP70Q9UH65 585 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 RGPD3A6NKT7 1758 aaPredicted RBP7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 RGPD4Q7Z3J3 1758 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 ADGRB1O14514 1584 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 COL24A1Q17RW2 1714 aa7.89□□□□□ -1.15
TM9SF4-202ENST00000398022 CFAP70Q5T0N1 1121 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 RBM46Q8TBY0 533 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 C22orf23Q9BZE7 217 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 FAN1Q9Y2M0 1017 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 NUP188Q5SRE5 1749 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 KIAA1210Q9ULL0 1709 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 IPO5O00410 1097 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 WDR63Q8IWG1 891 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 UBXN4Q92575 508 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 ISY1Q9ULR0 285 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 IGHDP01880 384 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 MRRFQ96E11 262 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 SLC26A8Q96RN1 970 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 SENP7Q9BQF6 1050 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 SLIT2O94813 1529 aa7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 ARHGEF28Q8N1W1 1705 aaKnown RBP7.88□□□□□ -1.15
TM9SF4-202ENST00000398022 ZBTB9Q96C00 473 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 CAPN2P17655 700 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 KIAA2012Q0VF49 1180 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 HSP90B2PQ58FF3 399 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 LRCH2Q5VUJ6 765 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 CTR9Q6PD62 1173 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 HSCBQ8IWL3 235 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 MSH6P52701 1360 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 ERICH4A6NGS2 130 aa7.87□□□□□ -1.15
TM9SF4-202ENST00000398022 ERCC4Q92889 916 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms