RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 SH2B1Q9NRF2 756 aaPredicted RBP20.71■□□□□ 0.91
EWSR1-206ENST00000397938 AGLP35573 1532 aa20.7■□□□□ 0.9
EWSR1-206ENST00000397938 USP42Q9H9J4 1324 aaKnown RBP20.69■□□□□ 0.9
EWSR1-206ENST00000397938 ST3GAL1Q11201 340 aa20.69■□□□□ 0.9
EWSR1-206ENST00000397938 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
EWSR1-206ENST00000397938 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
EWSR1-206ENST00000397938 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
EWSR1-206ENST00000397938 EYA1Q99502 592 aa20.69■□□□□ 0.9
EWSR1-206ENST00000397938 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
EWSR1-206ENST00000397938 CHD2O14647 1828 aaKnown RBP20.68■□□□□ 0.9
EWSR1-206ENST00000397938 VPS37CA5D8V6 355 aaPredicted RBP20.68■□□□□ 0.9
EWSR1-206ENST00000397938 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
EWSR1-206ENST00000397938 SRGAP3O43295 1099 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 PTGS1P23219 599 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 ZSWIM6Q9HCJ5 1215 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 ADCK5Q3MIX3 580 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 KCNB2Q92953 911 aa20.67■□□□□ 0.9
EWSR1-206ENST00000397938 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 TTC6Q86TZ1 520 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 NUP62CLQ9H1M0 184 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 CYP46A1Q9Y6A2 500 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 ELP1O95163 1332 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 DTNBO60941 627 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 PTH1RQ03431 593 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 TYRO3Q06418 890 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 RUFY2Q8WXA3 655 aa20.66■□□□□ 0.9
EWSR1-206ENST00000397938 SPDYE4A6NLX3 237 aa20.65■□□□□ 0.9
EWSR1-206ENST00000397938 GLRX3O76003 335 aaKnown RBP20.65■□□□□ 0.9
EWSR1-206ENST00000397938 KIF20AO95235 890 aa20.65■□□□□ 0.9
EWSR1-206ENST00000397938 U2AF2P26368 475 aaKnown RBP eCLIP20.65■□□□□ 0.92e-12■■■■□ 20.7
EWSR1-206ENST00000397938 KRT85P78386 507 aa20.65■□□□□ 0.9
EWSR1-206ENST00000397938 ME3Q16798 604 aa20.65■□□□□ 0.9
EWSR1-206ENST00000397938 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
EWSR1-206ENST00000397938 PHAXQ9H814 394 aaKnown RBP20.64■□□□□ 0.9
EWSR1-206ENST00000397938 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.9
EWSR1-206ENST00000397938 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
EWSR1-206ENST00000397938 LIG1P18858 919 aa20.64■□□□□ 0.89
EWSR1-206ENST00000397938 HSP90AB4PQ58FF6 505 aa20.63■□□□□ 0.89
EWSR1-206ENST00000397938 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
EWSR1-206ENST00000397938 LUZP1Q86V48 1076 aa20.63■□□□□ 0.89
EWSR1-206ENST00000397938 TTC21AQ8NDW8 1320 aa20.63■□□□□ 0.89
EWSR1-206ENST00000397938 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
EWSR1-206ENST00000397938 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
EWSR1-206ENST00000397938 SYCP1Q15431 976 aa20.62■□□□□ 0.89
EWSR1-206ENST00000397938 NCBP1Q09161 790 aaKnown RBP20.62■□□□□ 0.89
EWSR1-206ENST00000397938 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
EWSR1-206ENST00000397938 NECAB1Q8N987 351 aa20.62■□□□□ 0.89
EWSR1-206ENST00000397938 IL17REQ8NFR9 667 aa20.62■□□□□ 0.89
EWSR1-206ENST00000397938 FEZ1Q99689 392 aa20.62■□□□□ 0.89
EWSR1-206ENST00000397938 NBPF7P0C2Y1 421 aaPredicted RBP20.61■□□□□ 0.89
EWSR1-206ENST00000397938 LARP1BQ659C4 914 aaKnown RBP20.61■□□□□ 0.89
EWSR1-206ENST00000397938 CDC37L1Q7L3B6 337 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 CCDC186Q7Z3E2 898 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 AMPHP49418 695 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 NECTIN1Q15223 517 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 CAMK4Q16566 473 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 CBX8Q9HC52 389 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 SMTNL1A8MU46 457 aa20.61■□□□□ 0.89
EWSR1-206ENST00000397938 ANO6Q4KMQ2 910 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 PLA2G4DQ86XP0 818 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 TPCN1Q9ULQ1 816 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 CHMP3Q9Y3E7 222 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 LRMPQ12912 555 aa20.6■□□□□ 0.89
EWSR1-206ENST00000397938 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.6■□□□□ 0.89
EWSR1-206ENST00000397938 PTPRUQ92729 1446 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 ADGRL3Q9HAR2 1447 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
EWSR1-206ENST00000397938 ZNF75DP51815 510 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 HDGFP51858 240 aaKnown RBP20.59■□□□□ 0.89
EWSR1-206ENST00000397938 RBM43Q6ZSC3 357 aaKnown RBP20.59■□□□□ 0.89
EWSR1-206ENST00000397938 PDCP20941 246 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 FERMT3Q86UX7 667 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 CKAP2LQ8IYA6 745 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
EWSR1-206ENST00000397938 DDX19AQ9NUU7 478 aaKnown RBP20.59■□□□□ 0.89
EWSR1-206ENST00000397938 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
EWSR1-206ENST00000397938 BEND3Q5T5X7 828 aa20.58■□□□□ 0.89
EWSR1-206ENST00000397938 ZSCAN25Q6NSZ9 544 aa20.58■□□□□ 0.89
EWSR1-206ENST00000397938 FAM173BQ6P4H8 233 aa20.58■□□□□ 0.89
EWSR1-206ENST00000397938 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
EWSR1-206ENST00000397938 C16orf45Q96MC5 204 aaPredicted RBP20.58■□□□□ 0.89
EWSR1-206ENST00000397938 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.88
EWSR1-206ENST00000397938 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.88
EWSR1-206ENST00000397938 OS9Q13438 667 aaPredicted RBP20.57■□□□□ 0.88
EWSR1-206ENST00000397938 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 DRC7Q8IY82 874 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 CLASRPQ8N2M8 674 aaKnown RBP20.57■□□□□ 0.88
EWSR1-206ENST00000397938 SCAND2PQ9GZW5 306 aaPredicted RBP20.57■□□□□ 0.88
EWSR1-206ENST00000397938 OGFRQ9NZT2 677 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 NRBP1Q9UHY1 535 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
EWSR1-206ENST00000397938 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 CLSTN2Q9H4D0 955 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
EWSR1-206ENST00000397938 TRIM5Q9C035 493 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms