RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
AGAP3-202ENST00000397238 PI4K2BQ8TCG2 481 aa23.65■■□□□ 1.38
AGAP3-202ENST00000397238 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
AGAP3-202ENST00000397238 ANXA1P04083 346 aa23.65■■□□□ 1.38
AGAP3-202ENST00000397238 LIG1P18858 919 aa23.65■■□□□ 1.38
AGAP3-202ENST00000397238 NAA30Q147X3 362 aaPredicted RBP23.65■■□□□ 1.38
AGAP3-202ENST00000397238 LARP1BQ659C4 914 aaKnown RBP23.65■■□□□ 1.38
AGAP3-202ENST00000397238 FUCA2Q9BTY2 467 aa23.65■■□□□ 1.38
AGAP3-202ENST00000397238 NBPF7P0C2Y1 421 aaPredicted RBP23.65■■□□□ 1.38
AGAP3-202ENST00000397238 HYPKQ9NX55 129 aa23.64■■□□□ 1.38
AGAP3-202ENST00000397238 SPATA31D1Q6ZQQ2 1576 aa23.64■■□□□ 1.37
AGAP3-202ENST00000397238 TRIM5Q9C035 493 aa23.64■■□□□ 1.37
AGAP3-202ENST00000397238 SSH2Q76I76 1423 aa23.64■■□□□ 1.37
AGAP3-202ENST00000397238 HDGFL1Q5TGJ6 251 aa23.63■■□□□ 1.37
AGAP3-202ENST00000397238 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
AGAP3-202ENST00000397238 STK3Q13188 491 aa23.63■■□□□ 1.37
AGAP3-202ENST00000397238 NGDNQ8NEJ9 315 aaKnown RBP23.63■■□□□ 1.37
AGAP3-202ENST00000397238 EYA1Q99502 592 aa23.63■■□□□ 1.37
AGAP3-202ENST00000397238 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
AGAP3-202ENST00000397238 TTC6Q86TZ1 520 aa23.62■■□□□ 1.37
AGAP3-202ENST00000397238 NUP62CLQ9H1M0 184 aa23.62■■□□□ 1.37
AGAP3-202ENST00000397238 ME3Q16798 604 aa23.62■■□□□ 1.37
AGAP3-202ENST00000397238 CYP46A1Q9Y6A2 500 aa23.62■■□□□ 1.37
AGAP3-202ENST00000397238 COL9A3Q14050 684 aaPredicted RBP23.61■■□□□ 1.37
AGAP3-202ENST00000397238 MAP3K11Q16584 847 aa23.61■■□□□ 1.37
AGAP3-202ENST00000397238 ANO6Q4KMQ2 910 aa23.61■■□□□ 1.37
AGAP3-202ENST00000397238 DACT1Q9NYF0 836 aa23.61■■□□□ 1.37
AGAP3-202ENST00000397238 TYRO3Q06418 890 aa23.6■■□□□ 1.37
AGAP3-202ENST00000397238 CDC37L1Q7L3B6 337 aa23.6■■□□□ 1.37
AGAP3-202ENST00000397238 SSH3Q8TE77 659 aa23.6■■□□□ 1.37
AGAP3-202ENST00000397238 TNMDQ9H2S6 317 aa23.6■■□□□ 1.37
AGAP3-202ENST00000397238 KIF1BPQ96EK5 621 aa23.6■■□□□ 1.37
AGAP3-202ENST00000397238 TAF7Q15545 349 aaPredicted RBP23.59■■□□□ 1.37
AGAP3-202ENST00000397238 FAM200AQ8TCP9 573 aa23.59■■□□□ 1.37
AGAP3-202ENST00000397238 KRT85P78386 507 aa23.58■■□□□ 1.37
AGAP3-202ENST00000397238 UTP14CQ5TAP6 766 aaKnown RBP23.58■■□□□ 1.37
AGAP3-202ENST00000397238 USHBP1Q8N6Y0 703 aa23.58■■□□□ 1.37
AGAP3-202ENST00000397238 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.37
AGAP3-202ENST00000397238 TNNT1P13805 278 aa23.57■■□□□ 1.36
AGAP3-202ENST00000397238 TPCN1Q9ULQ1 816 aa23.57■■□□□ 1.36
AGAP3-202ENST00000397238 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
AGAP3-202ENST00000397238 GNAT3A8MTJ3 354 aa23.57■■□□□ 1.36
AGAP3-202ENST00000397238 CEBPZQ03701 1054 aaKnown RBP23.57■■□□□ 1.36
AGAP3-202ENST00000397238 ZNF771Q7L3S4 317 aaPredicted RBP23.57■■□□□ 1.36
AGAP3-202ENST00000397238 CBX8Q9HC52 389 aa23.57■■□□□ 1.36
AGAP3-202ENST00000397238 RAB11FIP3O75154 756 aa23.56■■□□□ 1.36
AGAP3-202ENST00000397238 FOSBP53539 338 aa23.56■■□□□ 1.36
AGAP3-202ENST00000397238 ST3GAL1Q11201 340 aa23.56■■□□□ 1.36
AGAP3-202ENST00000397238 TPD52L1Q16890 204 aaPredicted RBP23.56■■□□□ 1.36
AGAP3-202ENST00000397238 BICD2Q8TD16 824 aa23.56■■□□□ 1.36
AGAP3-202ENST00000397238 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.56■■□□□ 1.36
AGAP3-202ENST00000397238 V9GYY5 206 aaPredicted RBP23.56■■□□□ 1.36
AGAP3-202ENST00000397238 TPM3P06753 285 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 ZKSCAN1P17029 563 aaPredicted RBP23.55■■□□□ 1.36
AGAP3-202ENST00000397238 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 FBXW7Q969H0 707 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 PI4KAP2A4QPH2 592 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 PI4KAP1Q8N8J0 262 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 DNAJC25Q9H1X3 360 aa23.55■■□□□ 1.36
AGAP3-202ENST00000397238 SPATA32Q96LK8 384 aa23.54■■□□□ 1.36
AGAP3-202ENST00000397238 GTPBP4Q9BZE4 634 aaKnown RBP23.54■■□□□ 1.36
AGAP3-202ENST00000397238 FAM227BQ96M60 508 aa23.54■■□□□ 1.36
AGAP3-202ENST00000397238 CLASRPQ8N2M8 674 aaKnown RBP23.54■■□□□ 1.36
AGAP3-202ENST00000397238 RUFY2Q8WXA3 655 aa23.54■■□□□ 1.36
AGAP3-202ENST00000397238 IFIT2P09913 472 aaKnown RBP23.53■■□□□ 1.36
AGAP3-202ENST00000397238 NCBP1Q09161 790 aaKnown RBP23.53■■□□□ 1.36
AGAP3-202ENST00000397238 VPS53Q5VIR6 699 aa23.53■■□□□ 1.36
AGAP3-202ENST00000397238 DDX11Q96FC9 970 aa23.53■■□□□ 1.36
AGAP3-202ENST00000397238 NPHP1O15259 732 aa23.53■■□□□ 1.36
AGAP3-202ENST00000397238 RBM8AQ9Y5S9 174 aaKnown RBP23.53■■□□□ 1.36
AGAP3-202ENST00000397238 AOX1Q06278 1338 aa23.53■■□□□ 1.36
AGAP3-202ENST00000397238 DLC1Q96QB1 1528 aa23.52■■□□□ 1.36
AGAP3-202ENST00000397238 GLRX3O76003 335 aaKnown RBP23.52■■□□□ 1.36
AGAP3-202ENST00000397238 A0A087WWV3 80 aa23.51■■□□□ 1.35
AGAP3-202ENST00000397238 LARP1Q6PKG0 1096 aaKnown RBP23.51■■□□□ 1.35
AGAP3-202ENST00000397238 ANKRD7Q92527 254 aa23.51■■□□□ 1.35
AGAP3-202ENST00000397238 ZSCAN31Q96LW9 406 aaPredicted RBP23.51■■□□□ 1.35
AGAP3-202ENST00000397238 IL17RAQ96F46 866 aa23.51■■□□□ 1.35
AGAP3-202ENST00000397238 SH2B1Q9NRF2 756 aaPredicted RBP23.51■■□□□ 1.35
AGAP3-202ENST00000397238 CHPF2Q9P2E5 772 aa23.51■■□□□ 1.35
AGAP3-202ENST00000397238 CLIP2Q9UDT6 1046 aa23.51■■□□□ 1.35
AGAP3-202ENST00000397238 PPFIA3O75145 1194 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 ZNF165P49910 485 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 ARID5BQ14865 1188 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 ZSWIM6Q9HCJ5 1215 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 ADAMTS13Q76LX8 1427 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 RIMS1Q86UR5 1692 aaKnown RBP23.5■■□□□ 1.35
AGAP3-202ENST00000397238 ZSCAN25Q6NSZ9 544 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 CCDC112Q8NEF3 446 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 CCDC8Q9H0W5 538 aaPredicted RBP23.5■■□□□ 1.35
AGAP3-202ENST00000397238 NR1I2O75469 434 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 CREB3L3Q68CJ9 461 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 AACSQ86V21 672 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 TAF6LQ9Y6J9 622 aa23.5■■□□□ 1.35
AGAP3-202ENST00000397238 NLRP6P59044 892 aa23.49■■□□□ 1.35
AGAP3-202ENST00000397238 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
AGAP3-202ENST00000397238 POLA2Q14181 598 aa23.49■■□□□ 1.35
AGAP3-202ENST00000397238 CACTINQ8WUQ7 758 aaKnown RBP23.49■■□□□ 1.35
AGAP3-202ENST00000397238 TRMT1Q9NXH9 659 aaKnown RBP23.48■■□□□ 1.35
AGAP3-202ENST00000397238 ZNF75DP51815 510 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms