RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
MCF2L-205ENST00000397017 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
MCF2L-205ENST00000397017 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
MCF2L-205ENST00000397017 TCEANC2Q96MN5 208 aa18.35■□□□□ 0.53
MCF2L-205ENST00000397017 RABEP1Q15276 862 aa18.35■□□□□ 0.53
MCF2L-205ENST00000397017 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
MCF2L-205ENST00000397017 IFIT5Q13325 482 aaKnown RBP18.34■□□□□ 0.53
MCF2L-205ENST00000397017 LDHAL6AQ6ZMR3 332 aa18.34■□□□□ 0.53
MCF2L-205ENST00000397017 FBXW7Q969H0 707 aa18.34■□□□□ 0.53
MCF2L-205ENST00000397017 FER1L4A9Z1Z3 1794 aa18.34■□□□□ 0.53
MCF2L-205ENST00000397017 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-205ENST00000397017 KIF13AQ9H1H9 1805 aa18.34■□□□□ 0.53
MCF2L-205ENST00000397017 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.53
MCF2L-205ENST00000397017 ALDH1L1O75891 902 aa18.33■□□□□ 0.53
MCF2L-205ENST00000397017 IQSEC3Q9UPP2 1182 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-205ENST00000397017 TIMM10P62072 90 aa18.33■□□□□ 0.53
MCF2L-205ENST00000397017 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.53
MCF2L-205ENST00000397017 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.53
MCF2L-205ENST00000397017 GOLIM4O00461 696 aa18.33■□□□□ 0.52
MCF2L-205ENST00000397017 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.52
MCF2L-205ENST00000397017 SOS1Q07889 1333 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-205ENST00000397017 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
MCF2L-205ENST00000397017 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
MCF2L-205ENST00000397017 WDR17Q8IZU2 1322 aa18.32■□□□□ 0.52
MCF2L-205ENST00000397017 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
MCF2L-205ENST00000397017 G3V3G9 751 aa18.31■□□□□ 0.52
MCF2L-205ENST00000397017 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
MCF2L-205ENST00000397017 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
MCF2L-205ENST00000397017 TFCP2Q12800 502 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 GSE1Q14687 1217 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 GCKRQ14397 625 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 HSP90AB3PQ58FF7 597 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
MCF2L-205ENST00000397017 IFIT1P09914 478 aaKnown RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 TRIM44Q96DX7 344 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-205ENST00000397017 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-205ENST00000397017 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
MCF2L-205ENST00000397017 MTMR7Q9Y216 660 aa18.29■□□□□ 0.52
MCF2L-205ENST00000397017 HOXB7P09629 217 aa18.28■□□□□ 0.52
MCF2L-205ENST00000397017 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
MCF2L-205ENST00000397017 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
MCF2L-205ENST00000397017 IQSEC2Q5JU85 1478 aa18.28■□□□□ 0.52
MCF2L-205ENST00000397017 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
MCF2L-205ENST00000397017 CPA1P15085 419 aa18.28■□□□□ 0.52
MCF2L-205ENST00000397017 CARD10Q9BWT7 1032 aa18.27■□□□□ 0.52
MCF2L-205ENST00000397017 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
MCF2L-205ENST00000397017 NIP7Q9Y221 180 aaKnown RBP eCLIP18.27■□□□□ 0.52
MCF2L-205ENST00000397017 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
MCF2L-205ENST00000397017 H3BQV1 296 aa18.26■□□□□ 0.51
MCF2L-205ENST00000397017 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
MCF2L-205ENST00000397017 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
MCF2L-205ENST00000397017 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-205ENST00000397017 ZPR1O75312 459 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 ESYT1Q9BSJ8 1104 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-205ENST00000397017 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
MCF2L-205ENST00000397017 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-205ENST00000397017 DBNDD2Q9BQY9 259 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 CRB1P82279 1406 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 PIGBQ92521 554 aa18.25■□□□□ 0.51
MCF2L-205ENST00000397017 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 HAND2P61296 217 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
MCF2L-205ENST00000397017 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-205ENST00000397017 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 CYP46A1Q9Y6A2 500 aa18.24■□□□□ 0.51
MCF2L-205ENST00000397017 GOLGA6L3A6NEY3 463 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 RALYLQ86SE5 291 aaKnown RBP18.23■□□□□ 0.51
MCF2L-205ENST00000397017 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 SSFA2P28290 1259 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 TRAK2O60296 914 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 CHMLP26374 656 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 KDRP35968 1356 aa18.23■□□□□ 0.51
MCF2L-205ENST00000397017 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-205ENST00000397017 C3P01024 1663 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 TRDNQ13061 729 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 UBR1Q8IWV7 1749 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-205ENST00000397017 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
MCF2L-205ENST00000397017 FERMT3Q86UX7 667 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 RAB11FIP4Q86YS3 637 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 WWC3Q9ULE0 1092 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
MCF2L-205ENST00000397017 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-205ENST00000397017 SLIT1O75093 1534 aa18.22■□□□□ 0.51
MCF2L-205ENST00000397017 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
MCF2L-205ENST00000397017 NFXL1Q6ZNB6 911 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms