RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TRIM37O94972 964 aa25.68■■□□□ 1.7
VCPKMT-202ENST00000395860 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
VCPKMT-202ENST00000395860 GNAI3P08754 354 aa25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 LINS1Q8NG48 757 aa25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 KDM2BQ8NHM5 1336 aa25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 IGHDP01880 384 aa25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 IL6STP40189 918 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 NPM2Q86SE8 214 aaKnown RBP25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 RWDD1Q9H446 243 aaPredicted RBP25.67■■□□□ 1.7
VCPKMT-202ENST00000395860 INTS5Q6P9B9 1019 aaKnown RBP25.66■■□□□ 1.7
VCPKMT-202ENST00000395860 KIF6Q6ZMV9 814 aa25.66■■□□□ 1.7
VCPKMT-202ENST00000395860 MYD88Q99836 296 aa25.66■■□□□ 1.7
VCPKMT-202ENST00000395860 CCNL1Q9UK58 526 aaPredicted RBP25.66■■□□□ 1.7
VCPKMT-202ENST00000395860 KCNQ4P56696 695 aa25.65■■□□□ 1.7
VCPKMT-202ENST00000395860 CWF19L2Q2TBE0 894 aaKnown RBP25.65■■□□□ 1.7
VCPKMT-202ENST00000395860 USP44Q9H0E7 712 aa25.65■■□□□ 1.7
VCPKMT-202ENST00000395860 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
VCPKMT-202ENST00000395860 ARXQ96QS3 562 aa25.64■■□□□ 1.7
VCPKMT-202ENST00000395860 ZBTB3Q9H5J0 574 aa25.64■■□□□ 1.7
VCPKMT-202ENST00000395860 GNAI2P04899 355 aa25.62■■□□□ 1.69
VCPKMT-202ENST00000395860 IGKV5-2P06315 115 aa25.62■■□□□ 1.69
VCPKMT-202ENST00000395860 UBTFL1P0CB47 393 aaPredicted RBP25.62■■□□□ 1.69
VCPKMT-202ENST00000395860 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
VCPKMT-202ENST00000395860 C9orf78Q9NZ63 289 aaPredicted RBP25.61■■□□□ 1.69
VCPKMT-202ENST00000395860 CNTNAP4Q9C0A0 1308 aa25.61■■□□□ 1.69
VCPKMT-202ENST00000395860 NEURL1BA8MQ27 555 aa25.61■■□□□ 1.69
VCPKMT-202ENST00000395860 EIF5P55010 431 aaKnown RBP25.61■■□□□ 1.69
VCPKMT-202ENST00000395860 MAP3K15Q6ZN16 1313 aa25.6■■□□□ 1.69
VCPKMT-202ENST00000395860 NUP98P52948 1817 aa25.6■■□□□ 1.69
VCPKMT-202ENST00000395860 RPAP2Q8IXW5 612 aaPredicted RBP25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 ANKRD36CQ5JPF3 1778 aa25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 IBTKQ9P2D0 1353 aaPredicted RBP25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 ATP5J2-PTCD1G3V325 749 aa25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 NBPF7P0C2Y1 421 aaPredicted RBP25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 DZIP3Q86Y13 1208 aaKnown RBP25.59■■□□□ 1.69
VCPKMT-202ENST00000395860 C4BP0C0L5 1744 aa25.58■■□□□ 1.69
VCPKMT-202ENST00000395860 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
VCPKMT-202ENST00000395860 LRRFIP2Q9Y608 721 aaKnown RBP25.58■■□□□ 1.69
VCPKMT-202ENST00000395860 GCKRQ14397 625 aa25.57■■□□□ 1.68
VCPKMT-202ENST00000395860 RC3H1Q5TC82 1133 aaKnown RBP25.57■■□□□ 1.68
VCPKMT-202ENST00000395860 ANKRD44Q8N8A2 993 aa25.57■■□□□ 1.68
VCPKMT-202ENST00000395860 TBC1D2BQ9UPU7 963 aa25.57■■□□□ 1.68
VCPKMT-202ENST00000395860 GRM8O00222 908 aa25.56■■□□□ 1.68
VCPKMT-202ENST00000395860 ILDR1Q86SU0 546 aaPredicted RBP25.56■■□□□ 1.68
VCPKMT-202ENST00000395860 SIRT2Q8IXJ6 389 aa25.56■■□□□ 1.68
VCPKMT-202ENST00000395860 COL15A1P39059 1388 aa25.56■■□□□ 1.68
VCPKMT-202ENST00000395860 HDAC5Q9UQL6 1122 aa25.56■■□□□ 1.68
VCPKMT-202ENST00000395860 TNS1Q9HBL0 1735 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 EP400Q96L91 3159 aa25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 TCIRG1Q13488 830 aa25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 GIGYF2Q6Y7W6 1299 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 PELP1Q8IZL8 1130 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 UTYO14607 1347 aa25.55■■□□□ 1.68
VCPKMT-202ENST00000395860 ERVV-1B6SEH8 477 aa25.54■■□□□ 1.68
VCPKMT-202ENST00000395860 SLC27A3Q5K4L6 730 aa25.54■■□□□ 1.68
VCPKMT-202ENST00000395860 HSP90AB3PQ58FF7 597 aa25.54■■□□□ 1.68
VCPKMT-202ENST00000395860 BCORQ6W2J9 1755 aa25.54■■□□□ 1.68
VCPKMT-202ENST00000395860 A0A087WZG4 1122 aa25.53■■□□□ 1.68
VCPKMT-202ENST00000395860 HLFQ16534 295 aa25.53■■□□□ 1.68
VCPKMT-202ENST00000395860 LRRC4BQ9NT99 713 aa25.53■■□□□ 1.68
VCPKMT-202ENST00000395860 CWC25Q9NXE8 425 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-202ENST00000395860 APBA3O96018 575 aa25.52■■□□□ 1.68
VCPKMT-202ENST00000395860 CCDC191Q8NCU4 936 aa25.52■■□□□ 1.68
VCPKMT-202ENST00000395860 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
VCPKMT-202ENST00000395860 GNPATO15228 680 aa25.51■■□□□ 1.67
VCPKMT-202ENST00000395860 HMMRO75330 724 aa25.51■■□□□ 1.67
VCPKMT-202ENST00000395860 RPS6KA4O75676 772 aa25.51■■□□□ 1.67
VCPKMT-202ENST00000395860 PLSCR1O15162 318 aa25.5■■□□□ 1.67
VCPKMT-202ENST00000395860 ATP8B2P98198 1209 aa25.5■■□□□ 1.67
VCPKMT-202ENST00000395860 TXNRD1Q16881 649 aa25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 SMC5Q8IY18 1101 aa25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 GCC1Q96CN9 775 aa25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 RTCBQ9Y3I0 505 aaKnown RBP25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 AK7Q96M32 723 aa25.49■■□□□ 1.67
VCPKMT-202ENST00000395860 RGPD3A6NKT7 1758 aaPredicted RBP25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 RGPD4Q7Z3J3 1758 aa25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 CAMTA2O94983 1202 aa25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 HMGB2P26583 209 aaKnown RBP25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 UBE3BQ7Z3V4 1068 aa25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 SUCLG2Q96I99 432 aa25.48■■□□□ 1.67
VCPKMT-202ENST00000395860 SCN7AQ01118 1682 aa25.47■■□□□ 1.67
VCPKMT-202ENST00000395860 UBR3Q6ZT12 1888 aa25.47■■□□□ 1.67
VCPKMT-202ENST00000395860 JARID2Q92833 1246 aaPredicted RBP25.46■■□□□ 1.67
VCPKMT-202ENST00000395860 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
VCPKMT-202ENST00000395860 PNMA6EA0A0J9YXQ4 647 aa25.46■■□□□ 1.67
VCPKMT-202ENST00000395860 H7C1W4 665 aa25.46■■□□□ 1.67
VCPKMT-202ENST00000395860 GPTP24298 496 aa25.46■■□□□ 1.67
VCPKMT-202ENST00000395860 PPP1R42Q7Z4L9 355 aa25.45■■□□□ 1.66
VCPKMT-202ENST00000395860 PROM2Q8N271 834 aa25.45■■□□□ 1.66
VCPKMT-202ENST00000395860 DCTPP1Q9H773 170 aa25.45■■□□□ 1.66
VCPKMT-202ENST00000395860 PDZRN3Q9UPQ7 1066 aa25.45■■□□□ 1.66
VCPKMT-202ENST00000395860 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
VCPKMT-202ENST00000395860 CASP7P55210 303 aa25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 SMIM5Q71RC9 77 aa25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 NLRP10Q86W26 655 aa25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 SKAP1Q86WV1 359 aa25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 ZNF34Q8IZ26 560 aa25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 KAZALD1Q96I82 304 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms