RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CDCA7LQ96GN5 454 aa21.39■■□□□ 1.01
CXCL1-201ENST00000395761 DBF4Q9UBU7 674 aaPredicted RBP21.39■■□□□ 1.01
CXCL1-201ENST00000395761 SCN7AQ01118 1682 aa21.38■■□□□ 1.01
CXCL1-201ENST00000395761 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
CXCL1-201ENST00000395761 COPS6Q7L5N1 327 aa21.38■■□□□ 1.01
CXCL1-201ENST00000395761 ZBTB3Q9H5J0 574 aa21.38■■□□□ 1.01
CXCL1-201ENST00000395761 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
CXCL1-201ENST00000395761 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CXCL1-201ENST00000395761 KIF6Q6ZMV9 814 aa21.37■■□□□ 1.01
CXCL1-201ENST00000395761 NLGN2Q8NFZ4 835 aa21.37■■□□□ 1.01
CXCL1-201ENST00000395761 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 VAMP4O75379 141 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 CLEC4GQ6UXB4 293 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 CD2APQ9Y5K6 639 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
CXCL1-201ENST00000395761 SERPINB2P05120 415 aa21.35■■□□□ 1.01
CXCL1-201ENST00000395761 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
CXCL1-201ENST00000395761 HYPKQ9NX55 129 aa21.35■■□□□ 1.01
CXCL1-201ENST00000395761 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
CXCL1-201ENST00000395761 E9PSI1 815 aa21.34■■□□□ 1.01
CXCL1-201ENST00000395761 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
CXCL1-201ENST00000395761 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
CXCL1-201ENST00000395761 PHAXQ9H814 394 aaKnown RBP21.34■■□□□ 1.01
CXCL1-201ENST00000395761 RGL2O15211 777 aa21.33■■□□□ 1.01
CXCL1-201ENST00000395761 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
CXCL1-201ENST00000395761 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
CXCL1-201ENST00000395761 GIGYF2Q6Y7W6 1299 aaKnown RBP21.31■■□□□ 1
CXCL1-201ENST00000395761 TRMT2AQ8IZ69 625 aaKnown RBP21.31■■□□□ 1
CXCL1-201ENST00000395761 CCDC24Q8N4L8 307 aa21.31■■□□□ 1
CXCL1-201ENST00000395761 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
CXCL1-201ENST00000395761 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
CXCL1-201ENST00000395761 FAM177BA6PVY3 158 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 SLC4A2P04920 1241 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 GPTP24298 496 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 ZNF34Q8IZ26 560 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 STK31Q9BXU1 1019 aa21.29■■□□□ 1
CXCL1-201ENST00000395761 AFDNP55196 1824 aaKnown RBP21.28■■□□□ 1
CXCL1-201ENST00000395761 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
CXCL1-201ENST00000395761 G2E3Q7L622 706 aa21.28■■□□□ 1
CXCL1-201ENST00000395761 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
CXCL1-201ENST00000395761 NUP98P52948 1817 aa21.27■■□□□ 1
CXCL1-201ENST00000395761 NRXN2Q9P2S2 1712 aa21.27■■□□□ 1
CXCL1-201ENST00000395761 A0A0G2JLW4 131 aa21.27■■□□□ 1
CXCL1-201ENST00000395761 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
CXCL1-201ENST00000395761 ATP10DQ9P241 1426 aa21.27■■□□□ 1
CXCL1-201ENST00000395761 UBN2Q6ZU65 1347 aa21.27■□□□□ 0.99
CXCL1-201ENST00000395761 DPEP1P16444 411 aa21.26■□□□□ 0.99
CXCL1-201ENST00000395761 CNBD1Q8NA66 436 aa21.26■□□□□ 0.99
CXCL1-201ENST00000395761 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 TGFB2P61812 414 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 TCIRG1Q13488 830 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 WWC3Q9ULE0 1092 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 PXDNLA1KZ92 1463 aa21.25■□□□□ 0.99
CXCL1-201ENST00000395761 TPTE2Q6XPS3 522 aa21.24■□□□□ 0.99
CXCL1-201ENST00000395761 RIC3Q7Z5B4 369 aa21.24■□□□□ 0.99
CXCL1-201ENST00000395761 NPHP1O15259 732 aa21.23■□□□□ 0.99
CXCL1-201ENST00000395761 KCNA3P22001 575 aa21.23■□□□□ 0.99
CXCL1-201ENST00000395761 CHRNA5P30532 468 aa21.23■□□□□ 0.99
CXCL1-201ENST00000395761 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
CXCL1-201ENST00000395761 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
CXCL1-201ENST00000395761 KIAA1551Q9HCM1 1747 aa21.22■□□□□ 0.99
CXCL1-201ENST00000395761 ATP5J2-PTCD1G3V325 749 aa21.22■□□□□ 0.99
CXCL1-201ENST00000395761 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
CXCL1-201ENST00000395761 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
CXCL1-201ENST00000395761 DDX58O95786 925 aaKnown RBP21.21■□□□□ 0.99
CXCL1-201ENST00000395761 ST5P78524 1137 aa21.21■□□□□ 0.99
CXCL1-201ENST00000395761 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
CXCL1-201ENST00000395761 NLRP10Q86W26 655 aa21.21■□□□□ 0.99
CXCL1-201ENST00000395761 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
CXCL1-201ENST00000395761 ISCA1Q9BUE6 129 aa21.21■□□□□ 0.99
CXCL1-201ENST00000395761 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.99
CXCL1-201ENST00000395761 PI4KAP2A4QPH2 592 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 NTSR2O95665 410 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.98
CXCL1-201ENST00000395761 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.98
CXCL1-201ENST00000395761 FLIIQ13045 1269 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 GPR162Q16538 588 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 ERFEQ4G0M1 354 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 KSR2Q6VAB6 950 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 PI4KAP1Q8N8J0 262 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
CXCL1-201ENST00000395761 C2CD5Q86YS7 1000 aa21.19■□□□□ 0.98
CXCL1-201ENST00000395761 MYD88Q99836 296 aa21.19■□□□□ 0.98
CXCL1-201ENST00000395761 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
CXCL1-201ENST00000395761 NYXQ9GZU5 481 aa21.19■□□□□ 0.98
CXCL1-201ENST00000395761 ADCY9O60503 1353 aa21.19■□□□□ 0.98
CXCL1-201ENST00000395761 PDE6BP35913 854 aa21.18■□□□□ 0.98
CXCL1-201ENST00000395761 PPP1R42Q7Z4L9 355 aa21.18■□□□□ 0.98
CXCL1-201ENST00000395761 MRPL50Q8N5N7 158 aaKnown RBP21.18■□□□□ 0.98
CXCL1-201ENST00000395761 SSH1Q8WYL5 1049 aa21.18■□□□□ 0.98
CXCL1-201ENST00000395761 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
CXCL1-201ENST00000395761 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
CXCL1-201ENST00000395761 H0YIN7 160 aa21.17■□□□□ 0.98
CXCL1-201ENST00000395761 FKBP5Q13451 457 aaPredicted RBP21.17■□□□□ 0.98
CXCL1-201ENST00000395761 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
CXCL1-201ENST00000395761 ABCC12Q96J65 1359 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms